Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1223 118 2e-24 >seq1223 Length=156115 Score = 118 bits (130), Expect = 2e-24 Identities = 104/127 (82%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | || |||| | |||| ||||| || |||| ||||| | Sbjct 5467 GTACGAGAGGAACCGTTGGAT-CAGAC-ATTTGGCATTTGCACTTGCCTGAAAAGGCAAT 5410 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||||||||||||||||||| ||||||||| || | Sbjct 5409 GGTGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGCCAGAATCCAGGCTA 5350 Query 121 GAACGGG 127 ||||||| Sbjct 5349 GAACGGG 5343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819159526400