Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2100 84.2 9e-11 >seq2100 Length=282792 Score = 84.2 bits (92), Expect = 9e-11 Identities = 115/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGG-CGTCTCGCCG-GCCG 449063 |||||||| || ||| | | || ||||||||||| ||||| || | | || ||| | || Sbjct 45030 GTCATGCGGGAGGGGAACCCGTGAGGGTTCATGATCATGTCAGGACATATCCCCGAGTCG 45089 Query 449064 CGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGC 449123 | ||||||||||||||| | || || | || ||| | || |||||||| ||||| | Sbjct 45090 CA--GAAGGGCATGTCCTCCTGATTTACGATTAGTCCGGTAACACCCTTCTGTCCGTGTC 45147 Query 449124 GGCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGT 449160 | || | ||| || || || |||||| ||||||| Sbjct 45148 GACTACTGAATTTATCTCCAATCTCGGGTCTGCGTGT 45184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084599652769800