Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq20678 87.8 2e-15 seq10586 87.8 2e-15 >seq20678 Length=151248 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||| |||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 72978 AAACCAGCAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCG 72920 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||||||||||||||||||||||| |||| ||||| || Sbjct 72919 ACCTGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGT 72878 Score = 73.4 bits (80), Expect = 5e-11 Identities = 64/79 (81%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA-GCCTGCTTTGAACACTCTA 91 ||||||||| || ||||||||| ||||| |||| ||||||||||||||||||| Sbjct 61398 GTCCTATTCCATNATTCCATGCACCATTATTCAGGCGACCTGCCTGCTTTGAACACTCTA 61339 Query 92 ATTTTCTCAAGGTAAAAGT 110 ||||| |||| ||||| || Sbjct 61338 ATTTTTTCAAAGTAAACGT 61320 >seq10586 Length=39578 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||| |||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 14700 AAACCAGCAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCG 14642 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||||||||||||||||||||||| |||| ||||| || Sbjct 14641 ACCTGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGT 14600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594770012082