Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq20678 93.3 4e-17 seq10586 91.5 2e-16 >seq20678 Length=151248 Score = 93.3 bits (102), Expect = 4e-17 Identities = 116/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| | || ||||| || Sbjct 72878 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGGTCGCCTGAATAATGGTGCA 72937 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA-CCGCCCGTAAT 127 ||||||||| ||||||||| | ||||||||||||| ||||| | ||| | ||||| Sbjct 72938 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT-TCGGAGCTTGAGGTAAT 72995 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCA 161 ||| | | ||| | |||||| | ||||||| Sbjct 72996 GATTGAGAGGGACTGACGGGGGCATTCGTATTCA 73029 >seq10586 Length=39578 Score = 91.5 bits (100), Expect = 2e-16 Identities = 83/102 (81%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| | || ||||| || Sbjct 14600 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGGTCGCCTGAATAATGGTGCA 14659 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | ||||||||||||| ||||| Sbjct 14660 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT 14700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511630117920