Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq56612 569 7e-160 seq53559 221 4e-55 seq42761 118 3e-24 seq67369 114 4e-23 seq6401 100 9e-19 seq56277 86.0 2e-14 >seq56612 Length=27498 Score = 569 bits (630), Expect = 7e-160 Identities = 436/513 (85%), Gaps = 15/513 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 8313 CTTTTGCTCTACGTGAGGTTTCCGTCCTCACTGAGCTCACCTTAGGACACCTGCGTTACC 8254 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| |||||| Sbjct 8253 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCAGAGCGGATC 8194 Query 127 GGCCCG--CGAA-------GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG--TTC 175 ||| ||| ||| ||||| |||||| | | | | || | ||| Sbjct 8193 ACCCCCGACGACTAGGCCGGGAGCTTAATTCCAGAATCGAGGAGCTTGCGCCCCGCTTTC 8134 Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCG--CCGA 231 ||||| | ||| |||||||| ||||||||| |||||||||||||| |||| |||| Sbjct 8133 CGCTTAACTGAATAAGTAAAGAAACGATAAAAGTAGTGGTATTTCAACTTTGCATCCCGA 8074 Query 232 AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 | |||||||| ||| |||||||||||| || ||||||||||||||||||||||||| Sbjct 8073 AGGTGCTCCCACCTATGCTACACCTCTCATGTTTCTTCACAAAGTCGGACTAGAGTCAAG 8014 Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 8013 CTCAACAGGGTCTTCTTTCCCCGCTGATTTGGCCGAGCCCGTTCCCTTGGCTGTGGTTTC 7954 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7953 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 7894 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7893 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 7834 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||| |||||||||||||||||||||||||||| Sbjct 7833 CTTGATTGAATTTCTTCACTTTGACATTCAGAG 7801 >seq53559 Length=231691 Score = 221 bits (244), Expect = 4e-55 Identities = 237/310 (76%), Gaps = 15/310 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 84139 CTTTTGCTCTACGTGAGGTTTCCGTCCTCACTGAGCTCACCTTAGGACACCTGCGTTACC 84198 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| |||||| Sbjct 84199 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCAGAGCGGATC 84258 Query 127 GGCCCG--CGAA-------GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG--TTC 175 ||| ||| ||| ||||| |||||| | | | | || | ||| Sbjct 84259 ACCCCCGACGACTAGGCCGGGAGCTTAATTCCAGAATCGAGGAGCTTGCGCCCCGCTTTC 84318 Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCG--CCGA 231 ||||| | ||| |||||||| ||||||||| |||||||||||||| |||| |||| Sbjct 84319 CGCTTAACTGAATAAGTAAAGAAACGATAAAAGTAGTGGTATTTCAACTTTGCATCCCGA 84378 Query 232 AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 | |||||||| ||| |||||||||||| || ||||||||||||||||||||||||| Sbjct 84379 AGGTGCTCCCACCTATGCTACACCTCTCATGTTTCTTCACAAAGTCGGACTAGAGTCAAG 84438 Query 292 CTCAACAGGG 301 |||||||||| Sbjct 84439 CTCAACAGGG 84448 >seq42761 Length=41034 Score = 118 bits (130), Expect = 3e-24 Identities = 68/70 (97%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7281 GAGAGTCATAGTTACACCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 7340 Query 499 TCAGAGCACT 508 |||||| ||| Sbjct 7341 TCAGAGTACT 7350 Score = 95.1 bits (104), Expect = 4e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 ||||||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||| Sbjct 6279 CAGTGGGAATCTCGTTAATCCATACATGCGCGTCACTATTTAGATGACCATGCATTTGGC 6338 Query 431 TA 432 || Sbjct 6339 TA 6340 >seq67369 Length=60331 Score = 114 bits (126), Expect = 4e-23 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 || ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 13179 TACGAGAGTCATAGTTACACTCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 13238 Query 496 CATTCAGAGCACT 508 ||||||||| ||| Sbjct 13239 CATTCAGAGTACT 13251 Score = 98.7 bits (108), Expect = 3e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| Sbjct 12374 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTATTTAGATGACTATGCATTTGGC 12433 Query 431 TA 432 || Sbjct 12434 TA 12435 >seq6401 Length=168316 Score = 100 bits (110), Expect = 9e-19 Identities = 68/75 (91%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 TACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGG 510 |||||| ||| ||||||| |||||| |||||||||||||||||||||||||| ||||||| Sbjct 15665 TACTCCTGCCATTTACCCACGCTTGATTGAATTTCTTCACTTTGACATTCAGGGCACTGG 15724 Query 511 GCAGAA-ATCACATT 524 |||||| |||| ||| Sbjct 15725 GCAGAAGATCAGATT 15739 >seq56277 Length=1107 Score = 86.0 bits (94), Expect = 2e-14 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 386 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 47 Score = 80.6 bits (88), Expect = 9e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1061 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGA 1107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633980582304