Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq20678 470 4e-130 seq10586 304 4e-80 seq9145 143 8e-32 seq27305 78.8 3e-12 >seq20678 Length=151248 Score = 470 bits (520), Expect = 4e-130 Identities = 420/516 (81%), Gaps = 14/516 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| | ||||||||| Sbjct 61097 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 61038 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61037 TCCCCGTGCCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 60978 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| || |||||||||| ||| |||||||| Sbjct 60977 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATACCCCGTTACCAGTTATAACCATGGT 60918 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | ||||||||||||||||||||||||| ||||||| || |||||||| Sbjct 60917 AGGCATATCACGTACCATCGAAAGTTGATAGGGCAGACATTTGAAAGATATGTCGCCGGC 60858 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA--GGA---GCCCCGAAGG 292 ||||||| |||||| | |||||||| | ||||||| ||| | || Sbjct 60857 GCAAGGCCGTGCGATCAGCACAAAGTTATTCAGTTTCACCAATTGGACGGGTGTCGCCAC 60798 Query 293 GCG-TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATG 348 || ||||||| | ||||||||| | | | | || || ||||| | ||| | |||| Sbjct 60797 CCGACTGGTTTTGT-TCTAATAAACGCGCTCTTCCCGTGAGGTCGGAGCTTTGTGTCATG 60739 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 ||||||||||||||||||||| |||||||| |||| | |||| ||| || ||| |||| Sbjct 60738 TATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGAACCATAA 60679 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||||||| ||||||| | || | | || |||||||||||||||| Sbjct 60678 CTGATTTAATGAGCCATTCGCGGTTTCACCATGTA-AAAGTTTGTACTTAGACATGCATG 60620 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| Sbjct 60619 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 60584 Score = 470 bits (520), Expect = 4e-130 Identities = 420/516 (81%), Gaps = 14/516 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | ||| || || |||| ||||| | ||||||||| Sbjct 72655 GTACTCATTCCAATTACGGGGCCTCGAAACAGTCCCGTATTGTTATTTTTCGTCACTACC 72596 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72595 TCCCCGTACCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 72536 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 72535 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATAACCATGGT 72476 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | ||||||||||||||||||||||||| ||||||| || |||||||| Sbjct 72475 AGGCATATCACGTACCATCGAAAGTTGATAGGGCAGACATTTGAAAGATATGTCGCCGGC 72416 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA--GGA---GCCCCGAAGG 292 ||||||| |||||| | |||||||| | ||||||| ||| | || Sbjct 72415 GCAAGGCCGTGCGATCAGCACAAAGTTATTCAGTTTCACCAATTGGACGGGTGTCGCCAC 72356 Query 293 GCG-TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATG 348 || ||||||| | ||||||||| | | | | || || ||||| | ||| | |||| Sbjct 72355 CCGACTGGTTTTGT-TCTAATAAACGCGCTCTTCCCGTGAGGTCGGAGCTTTGTGTCATG 72297 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 ||||||||||||||||||||| |||||||| |||| | |||| ||| || ||| |||| Sbjct 72296 TATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGAACCATAA 72237 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||||||| ||||||| | || | | || |||||||||||||||| Sbjct 72236 CTGATTTAATGAGCCATTCGCGGTTTCACCATGTA-AAAGTTTGTACTTAGACATGCATG 72178 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| Sbjct 72177 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 72142 >seq10586 Length=39578 Score = 304 bits (336), Expect = 4e-80 Identities = 238/282 (84%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| | ||||||||| Sbjct 14377 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 14318 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14317 TCCCCGTGCCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 14258 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 14257 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATAACCATGGT 14198 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | ||||||||||||||||||||||||| ||||||| || |||||||| Sbjct 14197 AGGCATATCACGTACCATCGAAAGTTGATAGGGCAGACATTTGAAAGATATGTCGCCGGC 14138 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA 279 ||||||| |||||| | |||||||| | ||||||| Sbjct 14137 GCAAGGCCGTGCGATCAGCACAAAGTTATTCAGTTTCACCAA 14096 Score = 95.1 bits (104), Expect = 4e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14041 TTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 13987 >seq9145 Length=230870 Score = 143 bits (158), Expect = 8e-32 Identities = 158/206 (77%), Gaps = 12/206 (6%) Strand=Plus/Minus Query 302 TTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTT-TAGCATGTATTAGCTCT 358 ||| |||| ||||| | | |||| || ||||| | ||| | |||||||||||||| Sbjct 72245 TTTGATCTTATAAACGCGCTTTTTCCCTGAGGTCGGAGCTTTGTTTCATGTATTAGCTCT 72186 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||||| |||||||| |||| | | ||| ||| |||||||||||| | Sbjct 72185 AGAATTACCACAGTTATCCAAGTAGGATTG-------AAAGGAACTATAACTGATTTAGT 72133 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||| || |||||| | | || | | | | |||||||||||||||| |||||| Sbjct 72132 GAGCCATCAGCGGTTTCA-TATGTAAAA-GTATGGATTTAGACATGCATGGCTAAATCTT 72075 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| || Sbjct 72074 TGAGACAAGCATATGACTACTGGAAG 72049 >seq27305 Length=29880 Score = 78.8 bits (86), Expect = 3e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 8978 TAGACATGCATGGCTTAATCTTTGAAACAAGCATATGACTACTGGGAG 9025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509273649408