Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq17184 150 3e-34 seq747729 118 2e-24 seq250314 77.0 5e-12 seq467639 73.4 6e-11 >seq17184 Length=8893 Score = 150 bits (166), Expect = 3e-34 Identities = 177/227 (78%), Gaps = 13/227 (6%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 |||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| || Sbjct 6686 ACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-CCA 6743 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGATT- 119 ||| | | |||| || || | | ||||| | || || || | |||| | || Sbjct 6744 AGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGTTT 6800 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGC 178 |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||||| Sbjct 6801 ACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGTGC 6857 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 6858 AGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 6903 >seq747729 Length=401 Score = 118 bits (130), Expect = 2e-24 Identities = 140/186 (75%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 49 ACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA 108 ||| |||||| ||||||| | | || ||||||||| | ||||||||||||| Sbjct 401 ACTGGGAATT-CCTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGG 343 Query 109 TTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGT 167 ||||| | ||||||| |||| |||| ||| | || || ||| ||||||| Sbjct 342 GTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGT 283 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||||||||| |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 282 AGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCG 224 Query 228 CGTGGC 233 ||||| Sbjct 223 GGTGGC 218 >seq250314 Length=1653 Score = 77.0 bits (84), Expect = 5e-12 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 91 ATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCG-GCCAAGGTGATAGAC 148 ||||| | || || | | ||||| | ||||||| |||| || | ||||| | |||| Sbjct 621 ATCCCTAGCATGAAGGAGGTTCAACGGGTTACCCG-ACCTTTCCAGACAAGGACAAAGAC 679 Query 149 TCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 || ||| | | ||| ||||| | |||||||||| |||||||||||||||||||||| Sbjct 680 ACGCTGATTCCTTCAATGTAGAGTGCGTGCGGCCTCGAACATCTAAGGGCATCACAGA 737 >seq467639 Length=809 Score = 73.4 bits (80), Expect = 6e-11 Identities = 71/90 (79%), Gaps = 5/90 (6%) Strand=Plus/Plus Query 122 CCGGACCTGTCG-GCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || ||||| || | ||||| | | || || ||| | | |||||||||||||||||||| Sbjct 75 CCCGACCTTTCCAGGCAAGGACAAATACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGG 134 Query 181 CCCAGA----ACATCTAAGGGCATCACAGA 206 ||| || |||||||||||||||||||| Sbjct 135 CCCCGACTCGACATCTAAGGGCATCACAGA 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744697996810