Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017-
03-16] 1,002,334 sequences; 1,500,149,602 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq17184 156 8e-36
seq725093 147 4e-33
seq34421 86.0 1e-14
>seq17184
Length=8893
Score = 156 bits (172), Expect = 8e-36
Identities = 154/194 (79%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC--GT 184
|||||||||||| ||||||||| | ||||||||||||| |||||| | ||| | | ||
Sbjct 7623 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT-TCGGAGCTCGAGGT 7566
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||| ||||| | |||||| | ||||| ||| |||||||||||||||||
Sbjct 7565 AATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGG 7506
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| ||||| ||||||||||||||| || ||||| |||||||||||| ||| ||
Sbjct 7505 ATCGCCGTAAGACGAACTACTGCGAAAGCATTTGCCAAGCATGTTTTCATTAGTCA-AGA 7447
Query 305 ACGAAAGTTAGGGG 318
|||||||| || ||
Sbjct 7446 ACGAAAGTCAGAGG 7433
Score = 127 bits (140), Expect = 4e-27
Identities = 184/251 (73%), Gaps = 9/251 (4%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130
|||||||||| ||||||||||| | ||||||||| | ||| ||||| | ||||
Sbjct 8009 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 7950
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188
|| ||||| |||| ||| | | ||||| ||| ||||||| || | | ||||||
Sbjct 7949 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 7891
Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||||| ||| ||||| | |||||| | ||||||||||||||||||
Sbjct 7890 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 7831
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|||||||||| |||||||| || |||| ||||||||||||||||| |||||
Sbjct 7830 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 7772
Query 308 AAAGTTAGGGG 318
|||||||| ||
Sbjct 7771 AAAGTTAGAGG 7761
>seq725093
Length=441
Score = 147 bits (162), Expect = 4e-33
Identities = 184/245 (75%), Gaps = 8/245 (3%)
Strand=Plus/Minus
Query 79 TTTGAAA-AAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGGAAT 135
|||| || |||||| |||||| ||||||||| | | | ||||| |||||||||
Sbjct 342 TTTGTAACAAATTAAAGTGTTTAAAGCAGGCAATATCGCCTGAATAATGGTGCATGGAAT 283
Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC--GTAATGATTAA 193
||| ||||||||| | |||||||||||| |||||| | ||| | | |||||||||||
Sbjct 282 AATGGAATAGGACCTA-GGTTCTATTTTGATGGTTT-TCGGAGCTCGAGGTAATGATTAA 225
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| | |||| | | ||||| ||| ||||||||||||||||||| |
Sbjct 224 GAGGGACTGACGGGAGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGGAGTA 165
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| |||| |||||||| | || ||||| || ||||||||| ||| ||||||||||
Sbjct 164 AGACGAACTTCTGCGAAATCATTTGCCAAGCATATTTTCATTAGTCA-AGAACGAAAGTC 106
Query 314 AGGGG 318
|| ||
Sbjct 105 AGAGG 101
>seq34421
Length=6472
Score = 86.0 bits (94), Expect = 1e-14
Identities = 73/89 (82%), Gaps = 1/89 (1%)
Strand=Plus/Minus
Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289
||||||||||||||||| ||||| ||||||||||||||| || ||||| |||||
Sbjct 1232 AGGTGAAATTCTTGGATCGCCGTAAGACGAACTACTGCGAAAGCATTTGCCAAGCATGTT 1173
Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||| ||| |||||||||| || ||
Sbjct 1172 TTCATTAGTCA-AGAACGAAAGTCAGAGG 1145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 906026639232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |