Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq143602 255 1e-65 seq654539 91.5 2e-16 seq55966 91.5 2e-16 >seq143602 Length=2682 Score = 255 bits (282), Expect = 1e-65 Identities = 177/201 (88%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||| | ||||||||||||||| ||||||||| || ||||||||||||||||||| Sbjct 1574 AGTGGCTAAACAATCCAACGCTTGATGAATTCTGCGTCACAATGATAGGAAGAGCCGACA 1633 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1634 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 1693 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| ||||||| || | ||| | | | | |||||||||||||||| Sbjct 1694 GTGGTAACTTTTCTGACACCTCTTGCTTAAAACTCTTAAAGTCAAAAGGATCGATAGGCC 1753 Query 273 ACACTTTCATGGTTTGTATTC 293 || |||||| ||| ||||||| Sbjct 1754 ACGCTTTCACGGTCTGTATTC 1774 >seq654539 Length=520 Score = 91.5 bits (100), Expect = 2e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 ||||| || ||||||||||||||||||| ||||||| |||||||||| ||||||||||| Sbjct 376 AAAAAACAGTGTCGCTATGAACGCTTGGCAGCCACAATCCAGTTATCCTTGTGGTAACTT 435 Query 223 TTCTGGCA 230 ||||||| Sbjct 436 ATCTGGCA 443 >seq55966 Length=5003 Score = 91.5 bits (100), Expect = 2e-16 Identities = 112/154 (73%), Gaps = 17/154 (11%) Strand=Plus/Plus Query 139 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 || ||||| |||||||||||| |||||| || |||| ||| |||||||| Sbjct 1327 AGAAAGAGTCGACATCGAAGGCTCAAAA---------GC----AACGATTGACTGCCACA 1373 Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 258 ||||| ||||||||| |||||||||||| |||| || | ||| | | | || Sbjct 1374 AGCCATGTATCCCTGTTGTAACTTTTCTGCCACCACT----TAAAACACTGCAAGTCAAA 1429 Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||||||||||||| || ||| ||| ||| || Sbjct 1430 AGGATCGATAGGCCACGCTGTCACGGTCTGTTTT 1463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 845836058304