Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq17184 82.4 8e-14 seq725093 78.8 9e-13 >seq17184 Length=8893 Score = 82.4 bits (90), Expect = 8e-14 Identities = 93/121 (77%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TA 125 ||||||||||| ||||||||| | ||||||||||||| ||||| | ||| | | | || Sbjct 7622 CATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT-TCGGAGCTCGAGGTA 7565 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| || | ||| | |||||| | ||||| ||| | |||||||||||||||| Sbjct 7564 ATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGA 7505 Query 186 T 186 | Sbjct 7504 T 7504 >seq725093 Length=441 Score = 78.8 bits (86), Expect = 9e-13 Identities = 125/173 (72%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 18 TTTGAAA-AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTACCATGGAAT 74 |||| || |||||| || ||| ||||||||| | | | ||||| |||||||| Sbjct 342 TTTGTAACAAATTAAAGTGTTTAAAGCAGGCAATATCGCCTGAATAATGGTGCATGGAAT 283 Query 75 AATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAATGATAAA 133 ||| ||||||||| | |||||||||||| ||||| | ||| | | | ||||||| || Sbjct 282 AATGGAATAGGACCTA-GGTTCTATTTTGATGGTTT-TCGGAGCTCGAGGTAATGATTAA 225 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| | |||| | | ||||| ||| | ||||||||||||||||| Sbjct 224 GAGGGACTGACGGGAGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507028423360