Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq17184 453 4e-125 seq183596 441 2e-121 seq359010 408 1e-111 seq265338 161 3e-37 seq529022 156 1e-35 seq162977 87.8 6e-15 seq254480 84.2 7e-14 >seq17184 Length=8893 Score = 453 bits (502), Expect = 4e-125 Identities = 325/375 (87%), Gaps = 13/375 (3%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 1503 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 1562 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 1563 TAAACCGAAATTTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 1622 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 1623 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 1682 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1683 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATG 1742 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1743 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 1802 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1803 CCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 1862 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 1863 CACATTGTGTCAACA 1877 Score = 111 bits (122), Expect = 5e-22 Identities = 66/69 (96%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2139 ACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 2198 Query 525 GCGTCAACA 533 | ||||||| Sbjct 2199 GTGTCAACA 2207 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 873 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 932 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| |||||||||| |||| ||||||| Sbjct 933 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAATGTC 979 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 1198 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 1257 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 1258 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 1304 >seq183596 Length=2198 Score = 441 bits (488), Expect = 2e-121 Identities = 364/441 (83%), Gaps = 30/441 (7%) Strand=Plus/Plus Query 38 TGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 |||| | |||||||||||||||||||| ||| |||||||| ||||||||| |||||| Sbjct 5 TGAGCTCACCTTAGGACACCTGCGTTATCTTTTGACAGATGTACCGCCCCAGTAAAACTC 64 Query 98 CCCACCTGACAATGTCATCAACCCGGATCGGC-CCG----CGAAGGAC-----CTTAACG 147 ||| ||||||| |||| ||| | |||| | ||| | |||| | ||||| Sbjct 65 CCCGCCTGACACTGTCTTCAGAGCAGATCACCTCCGACGACTAAGGCCGGAGGCTTAATT 124 Query 148 CCAGAAAA--------TGGTCGGT-GAA--GACCAGTT------CCGCTTCATTGATTAA 190 |||||| || | | ||| || ||| | |||||| | ||| ||| Sbjct 125 CCAGAATCGAGGAGCTTGCGCCNTAGAATCGAGCAGCTTGCGCCCCGCTTAACTGAATAA 184 Query 191 GTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCT 250 ||||| ||||||||| |||||||||||||| || |||| | |||||||| ||| || Sbjct 185 GTAAAGAAACGATAAAAGTAGTGGTATTTCAAATGTGCCGGA---GCTCCCACCTATGCT 241 Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 242 ACACCTCTCATGTCTCTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 301 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 CCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 361 Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 362 CAGTGGGAATCTCGTTAATCCATCCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 421 Query 431 TACCTTAAGAGAGTCATAGTT 451 ||||||||||||||||||||| Sbjct 422 TACCTTAAGAGAGTCATAGTT 442 >seq359010 Length=1118 Score = 408 bits (452), Expect = 1e-111 Identities = 229/231 (99%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 977 AACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 918 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 858 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 798 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 GATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 747 >seq265338 Length=1560 Score = 161 bits (178), Expect = 3e-37 Identities = 105/114 (92%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 276 TCGG-ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT 334 |||| || ||| |||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 283 TCGGCACCAGATACAAGCTGAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTT 224 Query 335 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 |||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| Sbjct 223 CCCTTGGCTGTGGTTTTGCTAGATAGTATATAGGGACAGTGGAAATCTCGTTAA 170 >seq529022 Length=666 Score = 156 bits (172), Expect = 1e-35 Identities = 94/99 (95%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 529 CTTAAGAGAGTCTCAGTTACTCCCGCCGTTTTCCCGCGCTTGATTGAATTTCTTCACTTT 588 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 |||||||||||||||||| |||||||||||||||||||| Sbjct 589 GACATTCAGAGCACTGGGTAGAAATCACATTGCGTCAAC 627 >seq162977 Length=2425 Score = 87.8 bits (96), Expect = 6e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 947 TGAATTTGTTCACTTGGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAGCA 1002 >seq254480 Length=1626 Score = 84.2 bits (92), Expect = 7e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||| |||||||||||||||| | ||||| ||| ||| ||| ||| ||||||||| Sbjct 787 ATAGTAGAATGGGACAGTGGGAATCTGGGTAATCTATTGATGTGCGCCACCAATTAGATG 728 Query 417 ACGAGGCAT 425 ||||||||| Sbjct 727 ACGAGGCAT 719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1618809834432