Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq69560 89.7 8e-16 seq48559 78.8 2e-12 seq150947 75.2 2e-11 seq123081 75.2 2e-11 >seq69560 Length=4409 Score = 89.7 bits (98), Expect = 8e-16 Identities = 89/113 (79%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| || | |||||| | ||||||| || | || |||| || || | Sbjct 2583 GTAAGAGAGGAACTGCAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGCTGATAAGCCAAT 2640 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | || ||||||||||||| |||||||| |||||||||| |||||||||||| Sbjct 2641 GGTGCAAAGCTACCATCTGAGGGATTATGACTGAACGCCTGTAAGTCAGAATC 2693 >seq48559 Length=5419 Score = 78.8 bits (86), Expect = 2e-12 Identities = 86/112 (77%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | ||||||| | ||||||| || | || |||| || | | Sbjct 571 GTACGAGAGGAACTGCAGG-TTCAGAA-ATTTGGTTTATGTGCTTGGCTGATAAGCCTTT 514 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 ||||||||||||| | |||||||| |||||| |||||||||| |||| Sbjct 513 TGTGCGAAGCTACCATTTTAGGGATTATGACTGAACACCTCTAAGTCGGAAT 462 >seq150947 Length=2579 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 |||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 1917 GCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAAT 1869 >seq123081 Length=3019 Score = 75.2 bits (82), Expect = 2e-11 Identities = 81/105 (77%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||| ||| || | |||||| | ||||||| || | || |||| || || | Sbjct 1291 GTACGAGATAAACTGCAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGCTGATAAGCCAAT 1348 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 | |||||||||||||||| |||||||| |||||||||| |||| Sbjct 1349 GGTGCGAAGCTACCATCTGAAGGATTATGACTGAACGCCTGTAAG 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 811245477376