Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq17184 446 5e-123 seq9232 233 6e-59 seq17154 217 4e-54 seq228926 179 1e-42 seq246588 132 1e-28 seq834936 96.9 1e-17 >seq17184 Length=8893 Score = 446 bits (494), Expect = 5e-123 Identities = 415/517 (80%), Gaps = 16/517 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 8308 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 8367 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 8368 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 8427 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 8428 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 8487 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 8488 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 8547 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TATGAATCACCAAGGAGCCCCGA-----AG 291 | | || |||| ||| || | ||||| || ||| | | | | ||| | Sbjct 8548 GTACGAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCA-GTGTAACGATCTTGCG 8605 Query 292 GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAA-GTCGGGGTTTT--TAGCAT 347 || | | |||| |||||||| ||| | |||| ||| ||| | ||||| | |||| Sbjct 8606 ATCGCTTGGTTTTAGCCTAATAAAAGCACACGTTCCAGAAGGTCCGTGTTTTAATTGCAT 8665 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATA 407 |||||||||||||||||||||| |||||||| |||| | |||| ||| || ||| ||| Sbjct 8666 GTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGAACCATA 8725 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467 |||||||||||||||||||||| |||||||| | || | | | ||||||||||||||| Sbjct 8726 ACTGATTTAATGAGCCATTCGCGGTTTCACTATGTA-AAAGTATGTACTTAGACATGCAT 8784 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||||||||||| Sbjct 8785 GGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 8821 >seq9232 Length=11326 Score = 233 bits (258), Expect = 6e-59 Identities = 259/341 (76%), Gaps = 16/341 (5%) Strand=Plus/Plus Query 99 TTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCC 158 ||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 10878 TTCCTTGAATGTAGTAGCCGTTTCTCATGCTCCCTCTCCGGAATCGAACCCTTATTCCCG 10937 Query 159 GTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAA 218 |||| ||||| || ||||||||| | | ||||||||||||||||||||||||| | Sbjct 10938 GTTAACCGTTACAACTATGGTAGGCATATCACGTACCATCGAAAGTTGATAGGGCAGACA 10997 Query 219 TTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCAC 276 | |||| || | |||||||| | ||||| |||||| | ||||||| | |||| Sbjct 10998 TGTGAAAGATACGTCGCCGGCGCGAGGCCGTGCGATCAGCACAAAGTTATCCAGTCTCAC 11057 Query 277 CA-----AGGAGCCCCGAAGG--GCGTTGGTTTTTTATCTAATAAATACACCCCTTC--C 327 || | | |||| || || | |||| |||||||||| | | | ||| | Sbjct 11058 CAATCCGACGGGCCCTTGCGGACCCGACTGGTTTTGATCTAATAAACGCGCTCTTTCCGC 11117 Query 328 GAAGTC---GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT 384 || ||| | || || ||||||||||||||||||||||||| |||||||| |||| Sbjct 11118 GAGGTCAGAGCCGTGCTT--CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGG 11175 Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 | |||| ||| || ||| ||||||||||||||||||||| Sbjct 11176 ATTGTACGATCTAAGGAACCATAACTGATTTAATGAGCCAT 11216 >seq17154 Length=8898 Score = 217 bits (240), Expect = 4e-54 Identities = 155/177 (88%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| ||||||||||| Sbjct 514 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTTGTCACTACC 573 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 574 TCCCCGTGCCAGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 633 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 |||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct 634 TTCTCATGCTCCCTCTCCGGAAACGAACCCTGATTCCCCGTTACCCGTTACAACCAT 690 >seq228926 Length=1802 Score = 179 bits (198), Expect = 1e-42 Identities = 151/183 (83%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| | || || | ||| |||| ||||| | |||||||||| Sbjct 856 GTACTCATTCCAATTACGGGGCCTCGAA-ATCCC-GTATTGTTATTTTTCGTCACTACCT 799 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || ||| | || |||||||||||||||||||||||||||||||||||||| |||| || Sbjct 798 TCCTGTGCCAAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGAAGCCATT 739 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||| ||||||||| | ||||| |||||| ||||||| ||||| ||| ||||||||| Sbjct 738 TCTCATGCTCCCTCTACAGAATCAAACCCTGATTCCCCATTACCAGTTACAACCATGGTA 679 Query 181 GGC 183 ||| Sbjct 678 GGC 676 >seq246588 Length=1678 Score = 132 bits (146), Expect = 1e-28 Identities = 96/110 (87%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 ||| || ||| ||||||||||||||||||||||| | |||||||| | || | | | Sbjct 1508 ATCTAAGGAACCATAACTGATTTAATGAGCCATTCACGGTTTCACTATGTAAAA-GTATG 1566 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1567 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 1616 >seq834936 Length=286 Score = 96.9 bits (106), Expect = 1e-17 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 137 CGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCA 196 |||||||||||||| ||||||||| |||||| | |||||||||||| |||||| Sbjct 286 CGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTACCA 227 Query 197 TCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||||||||||||||||||| || ||||| | |||||| Sbjct 226 TCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCG 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495260747264