Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq83784 113 4e-20 seq705227 91.5 1e-13 seq162926 84.2 2e-11 >seq83784 Length=3932 Score = 113 bits (124), Expect = 4e-20 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 61036 TTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGC 61095 ||| | || |||||| | || || || | |||||||| |||||| | || |||||| Sbjct 3627 TTGAAGGATAATCCTAGACGATTTGTTGTCTTCCCCATTGAGTATCATGACATTTGGAAA 3686 Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| || || ||||| ||||||||||| | || || || ||||| || ||||| Sbjct 3687 ATGTACAAGAAAGCAGAAGCCTCCTTCTGGACAGCTGAAGAAGTTGATTTATCTAAAGAT 3746 Query 61156 ATGAATGACTGGGA-GCGTTTATCGA-GCGGTGAACAACATTTCATTAAACATGTGTTGG 61213 | | | ||||||| || | | || | || || ||||||| ||| |||||| ||| Sbjct 3747 CTCATTCACTGGGACGCTCTGAAAGATGAGGAGA--AACATTTTATTTCACATGTCCTGG 3804 Query 61214 CGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT 61253 | |||||||| ||| || || || || ||||| || || Sbjct 3805 CTTTCTTTGCAGCTAGTGATGGCATTGTAAATGAAAACTT 3844 >seq705227 Length=470 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 |||||||| || ||||| |||| ||||| ||| || || |||||| | || ||| Sbjct 97 TTCAATGCTATTGAGACTTTACCATGTGTGAAAAAGAAGGCAGACTGGGCCATTAAATGG 156 Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 || | |||| || ||| || ||| || | | || ||||| | || || || Sbjct 157 ATAAATGAAACAAATGCATCATATGCAGAAAGAGTTGTTGCCTTTGCAGCTGTTGAAGGG 216 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 |||||||| ||| ||||| ||||| || |||||||| || | ||| ||||||| Sbjct 217 ATATTTTTCTCTGGCAGTTTTGCAGCAATATTCTGGTTGAAAAAGAGAGGAATTATGCCT 276 Query 61579 GGTCTGACCTTCAGCAATGA 61598 ||||| || ||||||||||| Sbjct 277 GGTCTCACATTCAGCAATGA 296 >seq162926 Length=2426 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 || ||||||||||| | ||||||||||| |||||| || |||||| | ||| ||| Sbjct 1540 TGAGGACACATCAGGGTCCAATCACCATTAGATTCTACCCGCTTCATAAACAAATCTGGT 1599 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCG 66414 ||||| | ||| || || | || | ||| | ||| || | || ||| | || | Sbjct 1600 ATCCACATGGCATAAAACAAGTCTCTTGCCCTGGACTCTTCCTTTCCTGTGTTCTTCTTG 1659 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCC 66454 | |||| | ||| |||||||| || ||||||||||||||| Sbjct 1660 C-AGTCCAAGAAATCAAAGATATCTGCATGCCATGGTTCC 1698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392711330929760