Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1567 129 6e-28 >seq1567 Length=1296 Score = 129 bits (142), Expect = 6e-28 Identities = 144/191 (75%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 |||||||||||| ||||||| ||||||||||||||||| ||||| | | | || Sbjct 881 CTGAAGCTTAGAGGCTTTTCCTGGAAGCATGGCATCAATGACTTCACTACCGTAG---TA 937 Query 65 ACTCGTCATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 |||| |||| || | |||||| || |||||||||||||| || ||||||| Sbjct 938 GCTCGACATCGTGTCTCAGCCTTAAAGAGAGCCGGATTTACCTAACTCTCAAGCCTACGC 997 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATT 182 ||| ||| ||||||||| ||||| || |||||||||||||||||| |||||||| | Sbjct 998 ACTTGAACCTGGACAACCGTCGCCAGGCCCACCTAGCCTTCTCCGTCCCCCCATCGCAAT 1057 Query 183 AACCAGAAGTA 193 ||||||| Sbjct 1058 TGTAAGAAGTA 1068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518345742312