Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1567 562 8e-158 >seq1567 Length=1296 Score = 562 bits (622), Expect = 8e-158 Identities = 387/432 (90%), Gaps = 9/432 (2%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 420 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 479 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 539 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC-GCGTT 179 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 540 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCGTG 599 Query 180 A-GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 | | |||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 600 AGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATC 659 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 || || |||||| |||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct 660 TTACGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCACCTGGTATCTGCGA 719 Query 299 CCGGCATGAGCT---TACG-GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAA 354 | ||| |||| | || ||| | ||||||| ||| ||| ||||||||||||| Sbjct 720 CTCTCATCAGCTCCATCCGCGAG---GGACTTCACCGTCAAGAGCGTACCTTCTCCCGAA 776 Query 355 GTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCT 414 |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 777 GTTACGGTACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCT 836 Query 415 CTACCCAACCAC 426 |||||| ||||| Sbjct 837 CTACCCGACCAC 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260663783168