Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1567 228 2e-57 >seq1567 Length=1296 Score = 228 bits (252), Expect = 2e-57 Identities = 220/280 (79%), Gaps = 12/280 (4%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58 ||| | |||||||||| | || | ||||||||| |||||| || ||||||| || || Sbjct 426 TACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 485 Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 | || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 486 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 543 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178 |||||||||||||||||||||||||||| ||||||| | | ||||| | | | Sbjct 544 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC---TCCGTGA 600 Query 179 ACAGATCCCC-----TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCT 233 | | |||| |||||||||| ||||||||||||||||| | ||||| || ||| Sbjct 601 GGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCT 660 Query 234 TGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 | ||| || ||| | |||||||||| |||||||| || Sbjct 661 TACGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGC 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062285218304