Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1567 152 1e-34 >seq1567 Length=1296 Score = 152 bits (168), Expect = 1e-34 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||||||||| | ||| ||||||||||||||| || ||||| ||||||||||||||| | Sbjct 245 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGCTCTCCTCCTAAAGAGTAACGGAGGAG 186 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | | ||| | || | | ||| ||| | || | | ||||||| |||| ||| | Sbjct 185 CACGAAGGTCAGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCTGGC 126 Query 232 TTGACTGCGACACCCTCAAG--TCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 ||||||||| | | | | | | |||||| |||||| || | || |||||||| || Sbjct 125 TTGACTGCG--AGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGG 68 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 67 TTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982293861504