Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01001286.1 Length=411 Score E Sequences producing significant alignments: (Bits) Value seq32 376 6e-102 >seq32 Length=1006 Score = 376 bits (416), Expect = 6e-102 Identities = 339/426 (80%), Gaps = 15/426 (4%) Strand=Plus/Minus Query 1 CGAGGAACGGCCCGTCATAGCCGTGGCAGAACTGCAGGACGT---GGCGATCAGCCG-AG 56 ||||||| || ||||| ||||||||||||||||||| || | || ||||| || Sbjct 892 CGAGGAAGGGGCCGTCGTAGCCGTGGCAGAACTGCAAAACCCACGGTTGACCAGCCCCAG 833 Query 57 CGT-----------GTCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATG 105 || |||||| ||| ||| ||||||||||||| |||||||||||| Sbjct 832 CGACCTCAGACATGGTCATACCAATCCTTGCCACCCTTGACCACCAGAATGTCTTCCATG 773 Query 106 ATCAGGTATTGCAGGTCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATC 165 |||||||| ||||||||||| ||| ||||||||| ||||| || | |||||||||||| Sbjct 772 ATCAGGTACTGCAGGTCGGAACCATAGAACATGTTTAGCGCATCGGTTGGCGAGCAGATC 713 Query 166 ATCGCTTCGCCACGGCGGTTGAGCGAGGTGTTCAGGGACACGCCGTTGCCGGTCAGCACT 225 |||| ||| || || ||||| |||||||||||||| ||||| || |||||||| || | Sbjct 712 ATCGGTTCACCGCGACGGTTCAGCGAGGTGTTCAGCGACACACCATTGCCGGTGAGTTTT 653 Query 226 TCCAGCTCTTTCATCATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACCTGGGCG 285 |||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct 652 TCCAGCTCCAGCATCATGTCGTAGTAACGCGGGTTGTACTCGCGCTTGAGCACTTGGGCG 593 Query 286 CGGGAGGTGCCATCTTCATGGACCACTTCCGGCACGCGGGTCTTCCACTCTTCCGACACT 345 || |||||||| ||||| || || ||||| |||||||| |||||||| || ||| Sbjct 592 CGCGAGGTGCCGTCTTCGTGTACTACTTCGCCAACGCGGGTTTTCCACTCATCATTCACC 533 Query 346 TCAAAGGTGAAGGTCATGAACGGCGCCGGGTGATCGACCTTGATCATCTGCGGGGCCACG 405 ||||| ||||||||||||||||| ||||||||||||||||| |||||| ||| | ||| Sbjct 532 TCAAACGTGAAGGTCATGAACGGGCTCGGGTGATCGACCTTGAGCATCTGTGGGCCAACG 473 Query 406 GTGTCG 411 || ||| Sbjct 472 GTATCG 467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1212668969088