Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq1567 152 4e-35 >seq1567 Length=1296 Score = 152 bits (168), Expect = 4e-35 Identities = 118/138 (86%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 29 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 88 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| | || | |||||| |||||| ||| ||||||||||||| Sbjct 89 CTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAA 148 Query 121 CACTAC-GATTTCCGACC 137 | || | ||| ||||||| Sbjct 149 C-CTCCTGATGTCCGACC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351964346800