Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq10576 114 4e-23 >seq10576 Length=382888 Score = 114 bits (126), Expect = 4e-23 Identities = 84/95 (88%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 115 aaaaaTTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTG 174 ||||||| || |||| |||||| |||||||||||| |||| |||||||||||||||||| Sbjct 239019 AAAAATTTCGG-ATGACCTGTGGCTAGGGGTGAAAGACTAATCAAACTTGGAAATAGCTG 238961 Query 175 GTTCTCTCCGAAAACTATTTAGGTAGTGC-CTCAA 208 ||| ||| ||||||||||||| ||||||| ||||| Sbjct 238960 GTTTTCTGCGAAAACTATTTAAGTAGTGCGCTCAA 238926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689417455616