Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1567 345 1e-92 >seq1567 Length=1296 Score = 345 bits (382), Expect = 1e-92 Identities = 414/556 (74%), Gaps = 20/556 (4%) Strand=Plus/Plus Query 14 CTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAGG 73 ||||||||||||| ||| ||| || |||| ||| |||||| || |||||| | || Sbjct 115 CTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGC 174 Query 74 GAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCAC 133 ||||| | || |||||||||| ||| ||||| | | |||||||| ||||||||||| Sbjct 175 TGACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGAGC-GCCCCAGTCAAACTACCCAC 233 Query 134 CAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGAT----ATCCACTACGGTCAG 189 ||| |||||||| |||||| ||| | ||||| | |||||| | ||| || || Sbjct 234 CAGACACTGTCCGCAACCCGGATTACGGGCCCACGTTAGAACACCAGCCATTAA----AG 289 Query 190 AGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCT 249 |||||||||||| | | ||||| ||| |||| | | ||| || ||||||||| Sbjct 290 GGTGGTATTTCAAGGATGGCTCCATGCAGACTGGCGTCCACACTTCAAAGCCTCCCACCT 349 Query 250 ATCCTACACAAACCGCACCGAATGC-CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCT 307 |||||||||| | ||| | || || | ||||||||||| ||||| | |||||||| Sbjct 350 ATCCTACACATCAAGGACC-AGTGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCT 408 Query 308 TTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTG 367 || |||| ||||||| | | ||||||| || | | ||||||||| | | || | Sbjct 409 TTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGG 468 Query 368 GTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGA 427 || |||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct 469 GTGGAGACAGCGTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGA 528 Query 428 ATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCC 487 ||||||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct 529 ATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA 588 Query 488 GCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCG 547 || || | |||| | | || | |||||||||| |||||||||||||| Sbjct 589 GCTTCTC------CGTG--AGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCG 640 Query 548 TCAGTCCGTATACCTC 563 ||| |||||||| || Sbjct 641 TCACACCGTATACGTC 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702216072704