Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq9558 168 2e-37 >seq9558 Length=35122 Score = 168 bits (186), Expect = 2e-37 Identities = 400/600 (67%), Gaps = 6/600 (1%) Strand=Plus/Plus Query 37811 TCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAG 37870 |||||||| |||||||| ||||| | ||||| | ||||| |||| ||||| Sbjct 10 TCCATCATCCTGGAACTGCTGTGGTTCCTGCGCGGCGACAGCAACGTGCGCTGGCTGCAG 69 Query 37871 GAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATT 37930 ||| ||| || || ||| | || ||||| ||| ||||||| || |||||| | Sbjct 70 GAGCGCGGCTGCACCATCTGGAACGAATGGGCACGCGAGGACGGCGACCTGGGCCCGGTC 129 Query 37931 TACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCA 37990 ||||||| |||||||||| ||| | ||||| ||||||||||||||| Sbjct 130 TACGGCGTGCAATGGCGCAACTGGCCCACGCCGGACGGCGGCCACATCGACCAGATCGCC 189 Query 37991 TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGG 38050 || ||| | || |||| | || ||| | ||||| | | || ||||| ||| Sbjct 190 GAAGTGGTCAAGCAGCTCAAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCCTGG 249 Query 38051 AATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTAT 38110 || || || || || ||||| ||| ||| || || | ||| ||||||||| Sbjct 250 AACGTGGCCGACCTGCCGCAGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTTCTAT 309 Query 38111 GTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGG 38170 || ||| ||||| | | ||| | | | |||||| || || | || | || Sbjct 310 GTGGCCGACGGCAAGCTCAGTTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGC 369 Query 38171 TTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGAC 38230 | || || |||||||| |||||||| || |||| || ||| | ||||| ||||||||| Sbjct 370 GTTCCCTTCAACATCGCCAGCTACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGAC 429 Query 38231 TTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTG 38290 || | || ||||| || | | |||||||||||| ||| | ||||| || ||| | Sbjct 430 CTGCAGGTGGGTGACTTCGTCTGGACCGGCGGCGACTGCCACATCTACAACAACCATTTC 489 Query 38291 GAACAAG-CGAAACTGCAGCTGACGCGCGAGCC--GCGCCCGCTGCCGAAGCTTGTGCTG 38347 | || | ||| || |||||| ||||| |||| |||| | |||| ||| | | Sbjct 490 GCCCAGGTCGAGAC-CCAGCTGGCGCGCCAGCCCTTCGCCTAC--CCGACGCTGCAGATC 546 Query 38348 AAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTAC 38407 || || ||| || ||||| | ||| || ||||| ||||| || ||||||||||| Sbjct 547 AAGCGCCGGCCCGACTCCATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTAC 606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130623239214600