Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq9558 129 9e-25 >seq9558 Length=35122 Score = 129 bits (142), Expect = 9e-25 Identities = 214/309 (69%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 196783 TTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCGTC 196842 ||| |||||||| ||||| || ||||| || ||||| || || || ||||||||||| Sbjct 330 TTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATCGCCAG 389 Query 196843 TTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTCGT 196902 ||||||||||||| |||||| |||| || || || || ||| || ||||| Sbjct 390 CTACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGCAGGTGGGTGACTTCGT 449 Query 196903 TTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAACAGCT 196962 ||||| ||||| ||| |||||||||| ||| || | | ||||| || ||||| Sbjct 450 CTGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGGTCGAGACCCAGCT 509 Query 196963 GTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTATCTT 197022 | | || | || || | ||||||||| ||||| ||| || ||| ||||| Sbjct 510 GGCGCGCCAGCCCTTCGCCTACCCGACGCTGCAGATCAAGCGCCGGCCCGACTCCATCTT 569 Query 197023 CGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGATTAAAGC 197082 || ||| | | ||| |||||||| | || |||||| | | || | | || || || Sbjct 570 CGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAGCACCACGAGCCCATCAAGGC 629 Query 197083 CCCGGTGGC 197091 ||| ||||| Sbjct 630 CCCCGTGGC 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771438203198880