Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq24522 154 1e-32 seq74122 91.5 1e-13 >seq24522 Length=437104 Score = 154 bits (170), Expect = 1e-32 Identities = 302/440 (69%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 || ||| || || || || || || |||||||| || || | ||||||||| ||| || Sbjct 250016 TACCTCATCTGGTGCCGTGTATTCAACAATTTCTGTACATAAATTACTGCATTTTATTGT 250075 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 || | || ||||| || |||||||| || || | ||||||||||| |||||| || || Sbjct 250076 CCCAAGGTTTTGTTGGTTGCTCTTGCGGTTACAAGAATCCTTGTACAGCATGTAAGGTGT 250135 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACG 66213 || || || ||| | || || | || | ||| | | || |||| || | Sbjct 250136 ACCAGTTTCGGTTTGAGCTTCTATAACTGCATACCAGACTTTCTGAGCTTTCAGAGTTCT 250195 Query 66214 TACCGCCCTACC---TTTGCGTTCGTAA-TGTTCGTAGAGGTGTTCGAAGGATTCACCCC 66269 | | |||| ||| ||| ||| || | || | || ||| || || |||| Sbjct 250196 TTTACCTTTACCAGCTTT---TTCATAACTGATA-TACAAGTCTTCAAATTCTTTTCCCC 250251 Query 66270 ATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTT 66329 | || || || || | ||| || | | |||||||||| | ||||||||||| | || Sbjct 250252 AAACATCCGAAAGGCCTGGGCATTCATTGGGACACATCAATGTCCAATCACCATTTTCTT 250311 Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389 | || || ||| || |||||||| ||||||||||| ||||| | || || ||||| | Sbjct 250312 CAACTCGTTTCATGAAAAGATCAGGAATCCAGAGGGCATAGAACAAGTCTCGGGCTCGCT 250371 Query 66390 GCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 | || || | || || | ||| |||| || ||||| |||||||| ||||||||||| Sbjct 250372 GTTCATCCTTTCCTGTATTCTTTTTGCAA-TCAAGGAAGTCAAAGATATCGGCATGCCAG 250430 Query 66449 GGTTCCAGGTAGATGGCGAA 66468 ||||| | ||| || || || Sbjct 250431 GGTTCTAAGTAAATAGCAAA 250450 >seq74122 Length=500396 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 |||||||||||||| ||||| || || | || |||||| |||||||| || || Sbjct 192006 TTGTTCAATGCCATAGAGACAATGCCATGCATTAAAAAGAAAGCTGATTGGGCTTTGAAA 192065 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | |||| | | ||| | || || | | || ||||| | ||| || Sbjct 192066 TGGATTTCTG--ACAAGGTCC-CATATTCAGAGCGTGTTGTTGCTTTTGCTGGGGTAGAA 192122 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | |||||| ||| || ||||| || || || ||||| ||||| ||||| | ||| Sbjct 192123 GGAATCTTTTTCTCTGGTTCTTTTGCTGCTATTTTCTGGTTAAAGAAGCGTGGTATCATG 192182 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGAT 61604 || ||| |||| ||||||||||| || || Sbjct 192183 CCTGGTTTGACATTCAGCAATGAATTAAT 192211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396833084867360