Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq952 80.6 1e-13 seq861 80.6 1e-13 seq971 71.6 6e-11 seq537 71.6 6e-11 >seq952 Length=22710 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| || |||||| |||||| ||||| ||||||||||| ||| || | Sbjct 3479 GGAAAAGAAACTAACAAGTATTCCCCCAGTAATGGCGAATGAACAGGGAAAAGCTCAAAG 3538 Query 61 CCGAATC 67 ||||||| Sbjct 3539 CCGAATC 3545 >seq861 Length=29000 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| || |||||| |||||| ||||| ||||||||||| ||| || | Sbjct 18982 GGAAAAGAAACTAACAAGTATTCCCCCAGTAATGGCGAATGAACAGGGAAAAGCTCAAAG 18923 Query 61 CCGAATC 67 ||||||| Sbjct 18922 CCGAATC 18916 >seq971 Length=21377 Score = 71.6 bits (78), Expect = 6e-11 Identities = 56/67 (84%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| || |||| | |||||| ||||| | ||||||||| ||| || | Sbjct 970 GGAAAAGAAACTAACAAGTATTCACCCAGTAATGGCGAATAAACAGGGAAAAGCTCAAAG 911 Query 61 CCGAATC 67 ||||||| Sbjct 910 CCGAATC 904 >seq537 Length=1382483 Score = 71.6 bits (78), Expect = 6e-11 Identities = 56/67 (84%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| || |||| | |||||| ||||| | ||||||||| ||| || | Sbjct 1038024 GGAAAAGAAACTAACAAGTATTCACCCAGTAATGGCGAATAAACAGGGAAAAGCTCAAAG 1037965 Query 61 CCGAATC 67 ||||||| Sbjct 1037964 CCGAATC 1037958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230397278400