Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq952 241 2e-61 seq861 241 2e-61 >seq952 Length=22710 Score = 241 bits (266), Expect = 2e-61 Identities = 206/249 (83%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 2428 TCATTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 2370 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC-CACCAAC--CATAG 132 || || | || | || || |||||||||||||||| || | ||| |||| Sbjct 2369 AATCT-CGTGTGAATTAAAATCACTAGTCCCTCTAAGAAGTCAATTCGGCAAGTGCATAC 2311 Query 133 TCGAT---GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | | ||||||| || | | ||||||||||||||||||||||||||||||| Sbjct 2310 GCACTTCCGCGACTATTTAACATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAA 2251 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 2250 ATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAACTCT 2191 Query 250 CAATCTGTC 258 ||||||||| Sbjct 2190 CAATCTGTC 2182 >seq861 Length=29000 Score = 241 bits (266), Expect = 2e-61 Identities = 206/249 (83%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 20033 TCATTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 20091 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC-CACCAAC--CATAG 132 || || | || | || || |||||||||||||||| || | ||| |||| Sbjct 20092 AATCT-CGTGTGAATTAAAATCACTAGTCCCTCTAAGAAGTCAATTCGGCAAGTGCATAC 20150 Query 133 TCGAT---GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | | ||||||| || | | ||||||||||||||||||||||||||||||| Sbjct 20151 GCACTTCCGCGACTATTTAACATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAA 20210 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 20211 ATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAACTCT 20270 Query 250 CAATCTGTC 258 ||||||||| Sbjct 20271 CAATCTGTC 20279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796790274060