Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq771 131 2e-28 >seq771 Length=42375 Score = 131 bits (144), Expect = 2e-28 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||||| | ||||| | |||||||||||||| | |||| |||| | ||| Sbjct 24626 GGGTCTTTCCGTCCTACTGCGGGCATGCGGCATCTTCACCGCAATTACAGTTTCGCCGAG 24567 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || ||||||| ||||| |||||||||||||||||||||||||| Sbjct 24566 ATCCTCTCCGAGACAGTCGTTCAGTCGTTACACGATTCGTGCAGGTCGGAACTTACCCGA 24507 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 24506 CAAGGAATTTCGCTACCTTAGGACCGTTA 24478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547193320740