Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq771 87.8 2e-15 >seq771 Length=42375 Score = 87.8 bits (96), Expect = 2e-15 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||| ||||| ||||| ||||||| | | |||||||||||| ||| Sbjct 24989 GTTGAGCGATGGCAATTCCACATTAAACCATCGGATCATTTGGGCCTGCTTTCGCATCTG 24930 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTAT-GCCATTGCACTAACCTCACGATGT 142 || || || |||| |||| || || |||| | ||||| | || | |||| | Sbjct 24929 CTTGACTTGTTGGTCTCACAGTTAACCCGGCTTCTAGCCATACC-CTCGTCGCACGGTTG 24871 Query 143 CCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 || |||||| | ||| || ||||| |||||||||||| Sbjct 24870 CCAACCGTGCTGAGCCGAGCTTCGCGCTCCTCCGTTA 24834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473594219120