Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq771 273 3e-71 >seq771 Length=42375 Score = 273 bits (302), Expect = 3e-71 Identities = 222/269 (83%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 7 GGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATG 66 |||||| | ||||||||| |||||| |||||||||||| || | ||| | |||| ||| Sbjct 25331 GGGCTTGGCACTTAGATGCTTTCAGCGCTTATCCCTTCCGCACATGGCTACGCAGCGATG 25272 Query 67 CACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGG 126 | | || | | ||||||| ||||||| || ||| |||||||||||||||||||||| Sbjct 25271 CCCCTGACGGAACAACTGCCACACCAGAAGTGCGTCATTCCCGGTCCTCTCGTACTAAGG 25212 Query 127 ACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGT 186 | | || ||||| |||||| ||||||| ||||| ||||||||||||||| |||||| Sbjct 25211 AATGAACCCCTCAAGTTTCCTCCGCCCACAGTGGATAAGGACCGAACTGTCTCACGACGT 25152 Query 187 TCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTT 246 |||||||||||||||||| || |||||| ||||||||||| ||||||||||||| || Sbjct 25151 TCTGAACCCAGCTCGCGTACCGCTTTAACCGGCGAACAGCCGGACCCTTGGGACCTTCTC 25092 Query 247 CAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||||| || |||||||||||| Sbjct 25091 CAGCCCCAGGATGCGATGAGCCGACATCG 25063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780790469360