Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq771 89.7 9e-16 >seq771 Length=42375 Score = 89.7 bits (98), Expect = 9e-16 Identities = 77/93 (83%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 159 AGCGA-ACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATT 217 ||||| ||| |||||| |||||||||| |||| | |||||||||||| ||| || |||| Sbjct 22782 AGCGACACGGGGCGAAGTGAAACATCTCAGTAACCCCAGGAAAAGAAAACAA-CGTGATT 22840 Query 218 CCCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250 || |||||||||||||||||| ||| |||| Sbjct 22841 CCGCAAGTAGTGGCGAGCGAAAGCGGAACAGCC 22873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918388428160