Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq563 93.3 3e-14 >seq563 Length=403863 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| ||||||||||| ||||| || |||||||| ||||| ||| |||| Sbjct 150729 ACTTGGAATTCGCCGGACAGAACACGTCGCGTGTAGATGTTATTCGTGAAGGGCTCAATA 150670 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 || ||| |||| || | ||| |||||||| || || |||||||| || | |||| | Sbjct 150669 GACTCATTGTTTCCCAAAATCTGGGCAGTGGAGGCTGTTGGCATCGGGGAAACCAGAAGA 150610 Query 65549 GAGTTTCGCAATCCGT 65564 |||||||| | |||| Sbjct 150609 GAGTTTCGTACACCGT 150594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561894846400