Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq2467409 77.0 6e-12 seq446766 73.4 7e-11 >seq2467409 Length=122 Score = 77.0 bits (84), Expect = 6e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322 |||||||||||| ||||||| || || |||||| |||| |||||||||||||| |||| Sbjct 21 CGACTTACCCTGCCCCGATTAACGTTGGACAGGAACCCTTGGTCTTTCGGCGAGGAGGTT 80 Query 323 TCCCACCCCC 332 | ||||||| Sbjct 81 TTTCACCCCC 90 >seq446766 Length=1159 Score = 73.4 bits (80), Expect = 7e-11 Identities = 95/130 (73%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262 |||| |||||| ||||| || | |||||| ||| ||| || ||||| | | Sbjct 996 AGTACGGGAATATTAACCCGTTTT-CCATCGACTACGCATTTCTGCCTCGCCTTAGGGGC 1054 Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322 ||||| |||||| | ||||||| | ||||||||||| ||||| ||||| ||||||| Sbjct 1055 CGACTAACCCTGTCCTGATTAGCATGGGACAGGAAACCTTGGTCTTCCGGCGGGGGGGTT 1114 Query 323 TCCCACCCCC 332 | ||||||| Sbjct 1115 TTTCACCCCC 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921904492800