Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq963189 277 3e-72 seq3770078 89.7 9e-16 seq1200862 77.0 6e-12 seq1634843 73.4 7e-11 >seq963189 Length=590 Score = 277 bits (306), Expect = 3e-72 Identities = 220/260 (85%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGA 118 |||| || | | |||||| ||| ||| ||||||||||||||||||| | || | || Sbjct 66 GGGATCCTCGTCATTTACTGTGAGCAAAATAGAGTGTTCAAAGCAGGCTTAGGCCGTTGA 125 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 ||||||||||||||||||||| ||||||| | | |||||||||||||||| | | Sbjct 126 ATACATTAGCATGGAATAATAAGATAGGACCTTGG--TCTATTTTGTTGGTTTGCATT-C 182 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct 183 CAAGGTAATGATTAATAGGGATAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAAT 242 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||| Sbjct 243 TCTTGGATTTATGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAAT 302 Query 299 CAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||| Sbjct 303 CA-AGAACGAAAGTTAGGGG 321 >seq3770078 Length=293 Score = 89.7 bits (98), Expect = 9e-16 Identities = 127/173 (73%), Gaps = 7/173 (4%) Strand=Plus/Minus Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTAGCATGGAAT 135 |||||||||||| |||||||||||||| || || ||| | ||||||||| Sbjct 170 CTTTGAAAAAATG-GAGTGTTCAAAGCAAGCACAACAGCCTGAACAGCAGGGCATGGAAT 112 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAA 193 ||| ||||||||| | ||||||||| ||||||| | ||| ||| ||||||||| | Sbjct 111 AATGGAATAGGACCTT-GGTTCTATTGCATTGGTTT-TCGGAGTCCGAGGTAATGATTTA 54 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||| | | |||| | |||| ||| ||||||||||||||||||| Sbjct 53 GAGGGACTGACAGGGGCATTCATATTGCGGTGTGAGAGGTGAAATTCTTGGAT 1 >seq1200862 Length=100 Score = 77.0 bits (84), Expect = 6e-12 Identities = 61/72 (85%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 26 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 85 Query 98 TCAAAGCAGGCC 109 |||||||||||| Sbjct 86 TCAAAGCAGGCC 97 >seq1634843 Length=105 Score = 73.4 bits (80), Expect = 7e-11 Identities = 70/86 (81%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCG 183 ||||||||||||| ||||||||| | |||||||||| |||||||| | ||| ||| | Sbjct 93 AGCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAGTCCGAGG 36 Query 184 TAATGATTAATAGGGATAGTCGGGGG 209 |||||||| | ||||| | |||||| Sbjct 35 TAATGATTGAGAGGGACTGACGGGGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 878882283136