Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq232646 212 2e-52 seq3884288 163 1e-37 seq3548206 154 6e-35 seq3946981 109 2e-21 >seq232646 Length=1077 Score = 212 bits (234), Expect = 2e-52 Identities = 210/273 (77%), Gaps = 19/273 (7%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| | |||||||| | ||| ||| || Sbjct 844 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTGCTCGGGGTTCATCCC 785 Query 468 CGTGCGCGTAATGAAAGTGAACG---------------GAGGTGGGAACCCGTGAGGGTG 512 | ||||| ||| || ||||| | ||||| ||| | | || || Sbjct 784 CCAGCGCGGAATTAATGTGAAGGCGGACCTAGTCCGCTGAGGTAGGATGC--TTCGGCTG 727 Query 513 CACCATCGACCGATCCTGATGTCTTCGGATGGA--TTTGAGTAAGAGCATAGCTGTTGGG 570 ||| ||||||||| | |||| || ||| | ||||||| ||||||| ||||||| Sbjct 726 CACTATCGACCGACCATGATCCCTCGGGAGAAAGGTTTGAGTGTGAGCATACATGTTGGG 667 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct 666 ACCCGAAAGATGGTGAACTATGCCTGAGTAGGGCGAAGCCAGGGGAAACTCTGGTGGAGG 607 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||||| |||| ||||||||| ||||||| Sbjct 606 TCCGCAGCGATTCTAACGTGCAAATTGATCGTC 574 Score = 78.8 bits (86), Expect = 4e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 137 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||||||||||||| |||||| ||||||||||||| || || |||||||| ||||| |||| Sbjct 1076 GAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACCTGAAATTGCTGAAATGGAA 1017 Query 197 GCG 199 || Sbjct 1016 CCG 1014 >seq3884288 Length=419 Score = 163 bits (180), Expect = 1e-37 Identities = 116/133 (87%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| |||||||||||||||||||| ||||||||||| ||| |||||||| | ||||||| Sbjct 133 TTCAACGAGTCGAGTTGTTTGGGATTGCAGCTCTAAGCGGGTGGTAAATTCCATCTAAAG 74 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 73 CTAAATATTGGTGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 14 Query 154 TTGGAAAGAGAGT 166 ||| ||||||||| Sbjct 13 TTGAAAAGAGAGT 1 >seq3548206 Length=207 Score = 154 bits (170), Expect = 6e-35 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct 123 GGACCCGAAAGATGGTGAACTATGCCCGAGCAGGATGAAGCCAGAGGAAACTCTGGTGGA 64 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||| ||||| ||||||||||||||| | | |||||||||||||||| Sbjct 63 GGTCCGCAGCGATTCTGACGTGCAAATCGATCGCCCGACTTGGGTATAGGGGCGA 9 >seq3946981 Length=677 Score = 109 bits (120), Expect = 2e-21 Identities = 112/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAA-ATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| ||||||| |||||||||| | || | ||| |||||| | | || || |||||| Sbjct 675 GAGTCGGGTTGTTTTGGAATGCAGCCCAAAGACGGGTGGTAAACTCCATCCAAGGCTAAA 616 Query 99 TATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 || | || ||||||||||| ||||||| ||| ||||| ||||||| |||||| Sbjct 615 TACAAGGCACGAGACCGATAGATAACAAGTACCATGAGGGAAAGTTGAAAAGAACTTTGA 556 Query 158 AAAGAGAGTTAAAAAGCACGTGAA 181 | |||||||| || || ||||||| Sbjct 555 AGAGAGAGTTCAATAGGACGTGAA 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1994880351100