Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq371971 228 2e-57 seq253078 210 5e-52 seq2967281 152 1e-34 seq253077 138 3e-30 seq3152938 123 6e-26 seq2289621 123 6e-26 seq3187288 113 1e-22 seq1187605 113 1e-22 seq1141575 109 1e-21 seq1172817 93.3 1e-16 seq1064126 73.4 1e-10 >seq371971 Length=1724 Score = 228 bits (252), Expect = 2e-57 Identities = 284/386 (74%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 28 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCG 87 || |||||||||||||||||||||||| ||| |||||||||| |||||| | |||||| Sbjct 591 CTCCGTGCCAGCAGCCGCGGTAATACGGAGGAGGCAAGCGTTATCCGGAATGATTGGGCG 532 Query 88 TAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAA 147 |||||||| || ||| || ||| ||| | | ||| ||| | |||||||| ||| Sbjct 531 TAAAGCGTCCGTAGGTGGCTGTTCAAGTCTGCTGTCAAAGACAGTGGCTTAACTACTGAA 472 Query 148 TTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCA 207 ||| | | |||| || ||||||| | || || | |||||||| ||||||| Sbjct 471 AGGCAGTGGAAACTGAACAGCTAGAGTACGGTAGGGGCAGAGGGAATTCCCGGTGTAGCG 412 Query 208 GTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACAC 267 ||||||||||||||||| ||| ||||||| ||||||| || | ||||| || Sbjct 411 GTGAAATGCGTAGATATCGGGAAGAACACCGGTGGCGAAAGCGCTCTGCTGGGCCGTAAC 352 Query 268 TGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 327 |||| || | | |||||||| ||||||| || ||||||||||||| ||||||| || Sbjct 351 TGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGC 292 Query 328 CCTAAACGATATCAACTAGTTGTTG--GGGATTTACTTCCTTG--GTAACGTAGCTAACG 383 | |||||||| |||||| ||| | | || || || | || || |||||||| Sbjct 291 CGTAAACGATGGAAACTAGGTGTAGCCTGTATCGAC--CCGGGCTGTGCCGAAGCTAACG 234 Query 384 CGTGAAGTTGACCGCCTGGGGAATAC 409 ||| ||||| ||||||||||| ||| Sbjct 233 CGTTAAGTTTCCCGCCTGGGGAGTAC 208 >seq253078 Length=721 Score = 210 bits (232), Expect = 5e-52 Identities = 218/298 (73%), Gaps = 42/298 (14%) Strand=Plus/Plus Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||| ||| |||||| | ||| || ||| ||| Sbjct 219 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGCGGATTTGTCAGTCAGATGT 278 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| ||| ||||| ||||| ||||||||||||| ||||| | ||||||| || ||| Sbjct 279 GAAAGCCCTGGGCTCAACCTAGGAATTGCATTTGATACTGCGAGTCTAGAGTATGGTAGA 338 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGC-------------------------- 216 || | ||||||||||| ||||||| ||||||||| Sbjct 339 GGTGAGTGGAATTCCAGGTGTAGCGGTGAAATGCNNNNNNNNNNNNNNNNNNNNNNNNNN 398 Query 217 ----------------GTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 |||||||| |||||||||| || |||||||||| | | |||| Sbjct 399 NNNNNNNNNNNNNNNNGTAGATATCTGGAGGAACATCAGTGGCGAAGGCGACTCACTGGA 458 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318 || ||||||||| | | |||||||||||||||||||||||||||||||||||||| Sbjct 459 TCAATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 516 >seq2967281 Length=143 Score = 152 bits (168), Expect = 1e-34 Identities = 117/139 (84%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 180 AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAA 239 ||||| | |||||||||| |||||| ||||||| ||||||||| |||||||||||| Sbjct 139 AGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAG 80 Query 240 TGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 |||||||||| || | |||| | ||||||||| | | ||||||| |||||||||||| Sbjct 79 TGGCGAAGGCGGCTCACTGGCTCGATACTGACGCTGAGGTACGAAAGTGTGGGGAGCAAA 20 Query 300 CAGGATTAGATACCCTGGT 318 ||||||||||||||||||| Sbjct 19 CAGGATTAGATACCCTGGT 1 >seq253077 Length=378 Score = 138 bits (152), Expect = 3e-30 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 64 AGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTG 123 |||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| Sbjct 251 AGCGTTAATCGGAATTACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAAGCGAGATGTG 310 Query 124 AAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 ||| ||||||||| |||||||||| ||||||| |||| ||||||||||| |||| Sbjct 311 AAAGCCCCGGGCTCAACCTGGGAACTGCATTTCGAACTGGCAAACTAGAGTGTGATAGAG 370 Query 184 GGGGGT 189 || ||| Sbjct 371 GGTGGT 376 >seq3152938 Length=155 Score = 123 bits (136), Expect = 6e-26 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 31 CGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA 90 |||||||||||||||||||||||| |||| | |||||| ||||||||||||||||||| Sbjct 153 CGTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGTTCGGAATTACTGGGCGTAA 94 Query 91 AGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTG 150 ||||| || |||||| | | ||| || |||||||||| ||||| |||| |||| || Sbjct 93 AGCGTACGTAGGCGGATTGGAAAGTTGGGGGTGAAATCCCAGGGCTCAACCCTGGAACTG 34 Query 151 C 151 | Sbjct 33 C 33 >seq2289621 Length=118 Score = 123 bits (136), Expect = 6e-26 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 211 AAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGA 270 |||||| ||||||| ||| ||| || |||||||||||| || | | ||||| Sbjct 1 AAATGCTTAGATATTACACAGAATACCGATTGCGAAGGCAGCCTACTACGTATATACTGA 60 Query 271 CGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 328 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 61 CGCTCATGGACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCC 118 >seq3187288 Length=158 Score = 113 bits (124), Expect = 1e-22 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 294 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG 353 ||||||||||||||||||||||||||||||| ||| |||||||| || ||||| ||||| Sbjct 1 AGCAAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGTCTACTAGCCGTTGG 60 Query 354 GG-ATTTACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||| | || || || |||||||||| |||| ||||||||||||| ||| Sbjct 61 GGCCTTTGAGGCTTTAGTGGCGCAGCTAACGCGATAAGTAGACCGCCTGGGGAGTAC 117 >seq1187605 Length=100 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 173 GTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGA 232 ||||| |||||| ||| ||||| || ||||||| |||||||||||||| || || |||| Sbjct 100 GTGTGATAGAGGGTGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGA 41 Query 233 ACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACG 272 | ||| ||||||||||||||| |||||| |||||||||| Sbjct 40 ATACCGATGGCGAAGGCAGCCACCTGGGTCAACACTGACG 1 >seq1141575 Length=100 Score = 109 bits (120), Expect = 1e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 117 AGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGT 176 || ||||||| |||||||||||||||||||||||||||| |||| ||||||||| Sbjct 1 AGATGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTTAGAACTGGCAGACTAGAGTCA 60 Query 177 GTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGC 216 ||||||| ||||||||||| ||||||| ||||||||| Sbjct 61 TCTAGAGGGGAGTGGAATTCCAGGTGTAGCGGTGAAATGC 100 >seq1172817 Length=100 Score = 93.3 bits (102), Expect = 1e-16 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 240 TGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 |||||||||| | | ||||| |||||||| | | |||||||||||||||| || Sbjct 99 TGGCGAAGGCGGTTCTCTGGGCCTTTCCTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAA 40 Query 300 CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACG 335 |||| ||||||||||||||||||||||| |||||| Sbjct 39 CAGGCTTAGATACCCTGGTAGTCCACGCTGTAAACG 4 >seq1064126 Length=100 Score = 73.4 bits (80), Expect = 1e-10 Identities = 69/88 (78%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 151 CATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTG 210 |||| | |||| | ||| ||||| ||||| ||||||||||| ||||||| ||| Sbjct 13 CATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTG 72 Query 211 AAATGCGTAGATATGTGGAGGAACACCA 238 ||||||| ||| || ||||||||||||| Sbjct 73 AAATGCGCAGAGATATGGAGGAACACCA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1238425035328