Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq793819 102 8e-20 seq3080312 87.8 2e-15 >seq793819 Length=3153 Score = 102 bits (112), Expect = 8e-20 Identities = 125/166 (75%), Gaps = 5/166 (3%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| || | |||||| ||||||||| || ||| || | | | |||| Sbjct 2209 AAACCGACACAGGTGGGGTGGTTGAGAATACTAAGGGGCGCGAGGTAA-CTCTCTCTAAG 2267 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| || | | |||||||||||| || | || ||| || |||| || ||| Sbjct 2268 GAACTCGGCAAAATGGCTCCGTAACTTCGGGAGAAGGAGTGCCTGCC--GAAA-GGTAGG 2324 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||| ||| ||| |||||| |||||||| |||||||||||| || Sbjct 2325 TGGCACTGAAGAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 2370 >seq3080312 Length=150 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/99 (83%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 98 GACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAGAGAATAGG 157 ||||| |||||||||||| || ||||| | ||| | | |||| || ||||| ||| ||| Sbjct 4 GACCC-GTAACTTCGGGAGAA-GGGTCGCC-CCCTGTA-TGGGGGGCCGCAGTGAAGAGG 59 Query 158 TCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||||| |||||||| ||||||||||||||| ||| || Sbjct 60 TCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCAAA 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510779220828