Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3479114 174 4e-41 seq446766 174 4e-41 seq793819 159 8e-37 seq528855 113 1e-22 seq3080312 104 6e-20 seq2568161 102 2e-19 seq1191692 86.0 2e-14 seq1006709 73.4 1e-10 >seq3479114 Length=193 Score = 174 bits (192), Expect = 4e-41 Identities = 155/193 (80%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 205 GGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTT 264 |||||||||||||||||||||| |||||||| ||| || |||||| |||||||||||| Sbjct 193 GGCACCGGGCAGGCGTCACACCGTATACGTCATCTTACGATTTTGCACAGTGCTGTGTTT 134 Query 265 TTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTC- 323 ||||||||||||| |||| |||||| || || | | | ||||| ||| || || Sbjct 133 TTAATAAACAGTCCCAGCCACCTGGTCACTGCGGCTCCCGTCCGCTTAGAGAGTAAATCT 74 Query 324 CTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTC 383 | |||| | ||| ||||||||||||||||||||| | ||||||||||||||||| Sbjct 73 CATCACAGATAGGAGCGTACCTTCTCCCGAAGTTACGGTACAATTTTGCCTAGTTCCTTC 14 Query 384 CCCCGAGTTCTCT 396 |||||||||||| Sbjct 13 ACCCGAGTTCTCT 1 >seq446766 Length=1159 Score = 174 bits (192), Expect = 4e-41 Identities = 164/213 (77%), Gaps = 22/213 (10%) Strand=Plus/Plus Query 236 CACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTT 295 |||||||||||||||| |||||| ||||||| ||||||||| ||||| |||||| ||| Sbjct 569 CACTTTCGTGTTTGCACAGTGCTATGTTTTTGATAAACAGTTGCAGCCACCTGGTCACTT 628 Query 296 CGACCGGCATGAGCTTACGGAGCAAGTCC-TTCACCCTCACCGGCGCACCTTCTCCCGAA 354 |||| | | |||||||||||||||||| ||||| ||| ||||||||||||| Sbjct 629 CGACTCCCCTCAGCTTACGGAGCAAGTCCGATCACCAGAGGGAGCGTACCTTCTCCCGAA 688 Query 355 GTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT------------------ 396 |||||||| || ||||||||||||||||| |||||||||||| Sbjct 689 GTTACGGTACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTNNNNNNNNNNNNNNNNNN 748 Query 397 ---CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||||||||||||||||||||| ||||| Sbjct 749 NNNCAAGCGCCTTGGTATTCTCTACCTGACCAC 781 >seq793819 Length=3153 Score = 159 bits (176), Expect = 8e-37 Identities = 218/303 (72%), Gaps = 26/303 (9%) Strand=Plus/Minus Query 119 CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT 178 ||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||| | Sbjct 2506 CCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCATCAGCTTCAGAT 2447 Query 179 TAG--CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCC 236 || |||||| | ||||||||||||||| |||||||||||| ||| |||| || Sbjct 2446 TACTCCTAACCGACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATCG 2387 Query 237 ACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTC 296 ||| || || || ||| |||||||||| ||||||||||| |||| ||||| Sbjct 2386 TCTTGCGACTTAGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCC-----TCTTC 2332 Query 297 GACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 | | || | ||| | ||| | ||| | |||||||||||||| Sbjct 2331 -AGTGCCA----CCTAC---------CTTTC-----GGCAGGCACTCCTTCTCCCGAAGT 2291 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||||| ||| ||||||| |||||||| ||||| ||| || |||| |||||||| Sbjct 2290 TACGGAGCCATTTTGCCGAGTTCCTTAGAGAGAGTTACCTCGCGCCCCTTAGTATTCTCA 2231 Query 417 ACC 419 ||| Sbjct 2230 ACC 2228 >seq528855 Length=1053 Score = 113 bits (124), Expect = 1e-22 Identities = 210/303 (69%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 129 GTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCC 188 ||||| ||||| ||||||||||| ||||||| | | ||| ||| | || || Sbjct 248 GTTATAGTTACCACCGCCGTTTACTGGGGCTTAAGTTCACCGCTACGCATACACTCACAG 307 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | |||||||||| |||||||||||| |||| || ||||| || ||| || || Sbjct 308 TTCCCCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCGTCTTACGACTTC 367 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA---T 305 ||| | |||||||||| |||||||||| | ||||| ||| || || || Sbjct 368 GCACGGACCTGTGTTTTTGGTAAACAGTCGTTTCCCCCTGGACTCTGCGCCCCTCACCGC 427 Query 306 GAGCTTACGGAGCAAGTCCTTCAC-CCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 | | || | | || | || |||| || | |||| |||| ||||||||| | Sbjct 428 CACCACACCGCACGGGTGCACGACAGCTCA--GGTCCCCCTTATCCCAAAGTTACGGGGG 485 Query 365 CTTTTTGCCTAGTTCCTTC-CCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAAC 423 | ||||||| ||||||||| || ||| ||| ||| | ||||| ||||| ||||||| | | Sbjct 486 CATTTTGCCGAGTTCCTTCACCACGA-TTCACTCGATCGCCTCGGTATACTCTACCTATC 544 Query 424 CAC 426 ||| Sbjct 545 CAC 547 Score = 84.2 bits (92), Expect = 5e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||||| |||| ||||||||||| | |||||| Sbjct 49 GCATCTTTACTCGTAATGCAATTTCACCGAGTTCATGGTGGAGACAGTAGGGAAATCGTT 108 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 106 || ||||||||||||||||||||||||||||||| Sbjct 109 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAA 142 >seq3080312 Length=150 Score = 104 bits (114), Expect = 6e-20 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 |||||||||| |||||||||||| |||| ||||||||||| |||||| ||||||||| Sbjct 149 TTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACGTCATCTTTCGATTTTGCAGAG 90 Query 255 TGCTGTGTTTTTAATAAACAGTCGC 279 |||||||||| |||||||||||| Sbjct 89 CCCTGTGTTTTTGATAAACAGTCGC 65 >seq2568161 Length=125 Score = 102 bits (112), Expect = 2e-19 Identities = 77/91 (85%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||||||||| |||| | ||||||||| ||||||| | ||||||||||| | ||| Sbjct 35 CTGCATCTTGACAGGCAATTCAATTTCGCTGAGTCGATGTTGGAGACAGCGGGGAAGTCG 94 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCC 101 ||||||||||||||||||||||||||||||| Sbjct 95 TTACGCCATTCGTGCAGGTCGGAACTTACCC 125 >seq1191692 Length=100 Score = 86.0 bits (94), Expect = 2e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 335 CCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCT 394 |||| | ||||||| |||| |||||| | ||||||| ||||||||| | ||||| Sbjct 95 CCGGGCCTCCTTCTCGCGAACTTACGGAGGTATTTTGCCGAGTTCCTTCAACATCGTTCT 36 Query 395 CTCAAGCGCCTTGGTATTCTCTACC 419 ||||||||||||||||||||||||| Sbjct 35 CTCAAGCGCCTTGGTATTCTCTACC 11 >seq1006709 Length=100 Score = 73.4 bits (80), Expect = 1e-10 Identities = 72/93 (77%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 326 TCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCC 385 ||||| || ||| | |||||| || ||||||||| | | ||||||| | |||||| | Sbjct 8 TCACCAACATCGGTCCCCCTTCTTCCAAAGTTACGGGGGCATTTTGCCGAATTCCTTAAC 67 Query 386 CCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | ||||||||| | | |||| ||||||||||| Sbjct 68 CACAGTTCTCTCGAACTCCTTAGTATTCTCTAC 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1210767900544