Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq793819 260 3e-67 seq528855 190 4e-46 seq3080312 145 2e-32 seq2568161 80.6 5e-13 seq1006709 73.4 8e-11 >seq793819 Length=3153 Score = 260 bits (288), Expect = 3e-67 Identities = 206/243 (85%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 113 CCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-GAT 171 ||||||||||||||||||||||||||||||| || ||||||| || | ||||| ||| Sbjct 2506 CCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCATCAGCTTCAGAT 2447 Query 172 TGCTC-TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCG 230 | ||| |||| || |||||||||||| |||| |||||||||||||| || |||||||| Sbjct 2446 TACTCCTAACCGACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATCG 2387 Query 231 TCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGC 290 |||||||||||||| || ||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 2386 TCTTGCGACTTAGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTCTTCAGTGC 2327 Query 291 GGCCTGTC-ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 ||| | | | ||||||| ||||||||| ||||||||| | |||||||||||||||| Sbjct 2326 CACCTACCTTTCGGCAGGCACTCCTTCTCCCGAAGTTACGGAGCCATTTTGCCGAGTTCC 2267 Query 350 TTA 352 ||| Sbjct 2266 TTA 2264 >seq528855 Length=1053 Score = 190 bits (210), Expect = 4e-46 Identities = 195/259 (75%), Gaps = 27/259 (10%) Strand=Plus/Plus Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAG 182 ||||||||||| ||||||||||||||||||||||||||| ||| || | | || |||| Sbjct 248 GTTATAGTTACCACCGCCGTTTACTGGGGCTTAAGTTCACCGCTACGCATACACTCACAG 307 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 |||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||| Sbjct 308 TTCCCCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCGTCTTACGACTTC 367 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-------- 294 ||| |||||||||||||||||||||||| || ||| ||||||| || Sbjct 368 GCACGGACCTGTGTTTTTGGTAAACAGTCGTTTCCCCCTGGACTCTGCGCCCCTCACCGC 427 Query 295 ----------------TG--TCATAG-ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCA 335 || | || |||| |||||| |||| ||||||||||| || Sbjct 428 CACCACACCGCACGGGTGCACGACAGCTCAGGTCCCCCTTATCCCAAAGTTACGGGGGCA 487 Query 336 TTTTGCCGAGTTCCTTAAC 354 |||||||||||||||| || Sbjct 488 TTTTGCCGAGTTCCTTCAC 506 Score = 93.3 bits (102), Expect = 9e-17 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | |||||||||||||| || || |||||||| |||||||| Sbjct 49 GCATCTTTACTCGTAATGCAATTTCACCGAGTTCATGGTGGAGACAGTAGGGAAATCGTT 108 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAA 100 || || ||||||| |||||||||||||||||||| Sbjct 109 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAA 142 >seq3080312 Length=150 Score = 145 bits (160), Expect = 2e-32 Identities = 120/145 (83%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 |||||||||||||||||||||||| ||||| ||||||| || |||| ||| || ||||| Sbjct 150 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACGTCATCTTTCGATTTTGCAGA 91 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGA-CAG 306 |||||||||||| ||||||||||| ||| ||| ||| |||||||| |||| | | Sbjct 90 GCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTCTTCACTGCGGCCCCCCATACAGGGG 31 Query 307 GCACCCCTTCTCCCTAAGTTACGGG 331 || |||||||||| |||||||||| Sbjct 30 GCGACCCTTCTCCCGAAGTTACGGG 6 >seq2568161 Length=125 Score = 80.6 bits (88), Expect = 5e-13 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 4 CCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATC 63 || ||||||| || || | | ||||||| | ||||| || | ||||||| | || || Sbjct 34 CCTGCATCTTGACAGGCAATTCAATTTCGCTGAGTCGATGTTGGAGACAGCGGGGAAGTC 93 Query 64 GTTACGCCTTTCGTGCGGGTCGGAACTTACCC 95 |||||||| ||||||| ||||||||||||||| Sbjct 94 GTTACGCCATTCGTGCAGGTCGGAACTTACCC 125 >seq1006709 Length=100 Score = 73.4 bits (80), Expect = 8e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 310 CCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 |||||||| || ||||||||||| ||||||||||| ||||||||| | ||||||| Sbjct 23 CCCCTTCTTCCAAAGTTACGGGGGCATTTTGCCGAATTCCTTAACCACAGTTCTC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1020240972032