Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3566556 196 8e-48 seq2042767 185 1e-44 seq2316024 181 2e-43 seq2523329 107 3e-21 seq3058134 104 4e-20 seq3680874 96.9 6e-18 >seq3566556 Length=211 Score = 196 bits (216), Expect = 8e-48 Identities = 146/171 (85%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 124 CTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 ||||||| ||||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct 1 CTGCTTCACAATGATAGGAAGAGCCGACATCAAATGATCAAAAAGCAACGTCGATATGAA 60 Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAA 243 |||||||||||||||| |||||||||| |||||||||||||||| |||| || || |||| Sbjct 61 CGCTTGGCTGCCACAATCCAGTTATCCATGTGGTAACTTTTCTGACACCGCTTGCTTCAA 120 Query 244 ATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | ||| | | ||| |||| |||||||||||| || ||| | |||||| Sbjct 121 ACTCCGAAAGTCAAAACAATCGTTAGGCCACACTTCCACGGTCTTTATTCA 171 >seq2042767 Length=112 Score = 185 bits (204), Expect = 1e-44 Identities = 108/112 (96%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 124 CTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 CTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 53 Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 52 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCT 1 >seq2316024 Length=118 Score = 181 bits (200), Expect = 2e-43 Identities = 111/118 (94%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 60 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 61 GGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC 118 >seq2523329 Length=124 Score = 107 bits (118), Expect = 3e-21 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||| |||||||||| | ||||| | | ||||||||||| Sbjct 124 TTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATC 65 Query 265 GATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||||| |||||| |||||||||| Sbjct 64 GATAGGCCATGCTTTCACAGTTTGTATTC 36 >seq3058134 Length=148 Score = 104 bits (114), Expect = 4e-20 Identities = 77/90 (86%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||| ||||||| || ||||| | ||| | | |||||||| Sbjct 1 TTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCCGAAAGTCAAAAGGATC 60 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCA 294 | |||||||| |||||| ||| |||||||| Sbjct 61 GTTAGGCCACGCTTTCACGGTCTGTATTCA 90 >seq3680874 Length=247 Score = 96.9 bits (106), Expect = 6e-18 Identities = 91/114 (80%), Gaps = 4/114 (4%) Strand=Plus/Minus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||||||||| ||||||||||||||| ||| ||||||| ||||| || |||||||||| Sbjct 137 AAAGCAACGTCACTATGAACGCTTGGCAGCCGCAAGCCA-TTATCACTACGGTAACTTTT 79 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTT 278 || ||||||| | ||||| | | | | | ||||||| ||||||| |||| Sbjct 78 TTGACACCTCTTGTTTCAAACTCCTAAAGTC---AGGATCGTTAGGCCAGACTT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824631513144