Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq793819 248 2e-63 seq698051 116 7e-24 seq446766 104 4e-20 seq2558221 93.3 8e-17 >seq793819 Length=3153 Score = 248 bits (274), Expect = 2e-63 Identities = 191/227 (84%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 2811 GACAGTTTCAGGGGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAATGGTAACGGAGGCGC 2870 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||| | | ||||||| ||| |||||| || || | |||||||||||| ||||| | | Sbjct 2871 GCAAGGGTTCCCTCAGGCTGGTTGGAAATCAGCCGTAGAGTGCAAAGGCATAAGGGAGCT 2930 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||| | ||| |||||| |||||||||||||||||| |||| ||||||| |||||| Sbjct 2931 TGACTGCAAGACCTACAAGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGC 2990 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 2991 TGCGTGGAAAGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 3037 >seq698051 Length=436 Score = 116 bits (128), Expect = 7e-24 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 157 AGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCA 216 || ||||||||||||| | ||| | ||||| || ||||| | || |||||| Sbjct 266 AGCGTAACGGAGGCGCGCGAAGGTTGGCTCAGAGCGGTCGGAAATCGCTCGTTGAGTGCA 325 Query 217 AAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTT 276 | |||| ||| | ||||||||| || |||||| ||||| |||||||||||| | | Sbjct 326 ATGGCAGAAGCCAGCCTGACTGCGAGACTGACAAGTCGAGCAGAGACGAAAGTCGGCCAT 385 Query 277 AATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 | |||||||| ||| | || ||||| |||| |||||| ||||||||||| Sbjct 386 AGTGATCCGGTGGTCCCGAGTGGAAGGGCCATCGCTCAACGGATAAAAG 434 >seq446766 Length=1159 Score = 104 bits (114), Expect = 4e-20 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCA 209 |||||||||||||||||||| || | ||| | | || ||| ||| ||||| |||||| Sbjct 132 CTCCCAAAGAGTAACGGAGGAGCACGAAGGTGCGCTAAGCATGGTCGGAAATCATGCGGT 73 Query 210 CAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGT 269 |||| || |||| ||| | | |||||||||| || |||||| |||||| |||||||| Sbjct 72 TAGTGTAATGGCATAAGCGCGCTTGACTGCGAGACTGACAAGTCGAGCAGGTACGAAAGT 13 Query 270 CGGGCTTAATGA 281 || | || ||| Sbjct 12 AGGTCATAGTGA 1 >seq2558221 Length=125 Score = 93.3 bits (102), Expect = 8e-17 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 168 GGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGG 227 ||||||||||| | |||||||| ||| ||| || || | | |||| || ||| |||| Sbjct 125 GGCGCCCAAAGGTTCCCTCAGCCTGGTTGGTAATCAGGTGGTGAGTGTAAGTGCACAAGG 66 Query 228 GTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287 | | ||||||| || || || ||| ||||||||||||||||||| || ||||| | | Sbjct 65 GGGCTTGACTGTGAGACTGACAGGTCGAGCAGGGACGAAAGTCGGGACTAGTGATCTGAC 6 Query 288 GGTG 291 |||| Sbjct 5 GGTG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943415597632