Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq826873 161 2e-37 seq1145574 131 3e-28 seq469292 113 9e-23 seq2704621 111 3e-22 seq2459808 93.3 9e-17 seq371971 87.8 4e-15 >seq826873 Length=536 Score = 161 bits (178), Expect = 2e-37 Identities = 116/134 (87%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 202 GGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGG 261 ||||||||| |||||| |||| |||||| |||||| ||||| |||||||| ||||||||| Sbjct 10 GGCTCATCTAATAGCGAAAGGTCCGAAGATCCCCTCCTTTCCCCCGTAGGGCGTATGCGG 69 Query 262 TATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTC 321 ||||||| ||||||||| ||| ||||||||||| ||| ||||||| | || |||||| Sbjct 70 TATTAGCAGCCGTTTCCGGCTGTTGTCCCCCACTACTAGGTAGATTCCCACGCGTTACTC 129 Query 322 ACCCGTCCGCCGCT 335 |||||||||||||| Sbjct 130 ACCCGTCCGCCGCT 143 >seq1145574 Length=100 Score = 131 bits (144), Expect = 3e-28 Identities = 89/100 (89%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 145 AGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGC 204 || ||| ||||||||||||||| ||| ||||| |||||||||||||||||||| ||||| Sbjct 1 AGCTACAGATCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCCGACTTAGGC 60 Query 205 TCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTC 244 |||||| |||||||||| |||||| |||||||||||||| Sbjct 61 TCATCTATTAGCGCAAGGTCCGAAGATCCCCTGCTTTCTC 100 >seq469292 Length=320 Score = 113 bits (124), Expect = 9e-23 Identities = 110/137 (80%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 142 ACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTA 201 ||||| || ||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 134 ACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACTTG 75 Query 202 GGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGG 261 ||| |||| | || || || |||||| |||| |||| |||||| ||||||| Sbjct 74 GGCCAATCT-AAAG-GCGAGAGCCGAAG--CCCC--CTTTGGTCCGTAGACATTATGCGG 21 Query 262 TATTAGCGTCCGTTTCC 278 ||||||| ||||||| Sbjct 20 TATTAGCAGTCGTTTCC 4 >seq2704621 Length=130 Score = 111 bits (122), Expect = 3e-22 Identities = 80/91 (88%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 28 ACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCT 87 ||||||||||| |||||| |||| || | |||||| |||||||||| ||||||||||| Sbjct 41 ACACGCGGCAT-GGCTGGTTCAGAGTTGCCTCCATTGACCAATATTCCTCACTGCTGCCT 99 Query 88 CCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||||||| |||||||||||| || Sbjct 100 CCCGTAGGAGTCTGGTCCGTGTCTCAGTACC 130 >seq2459808 Length=122 Score = 93.3 bits (102), Expect = 9e-17 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| || || | | | |||||||| ||| ||| ||||||||| |||||| Sbjct 40 TTTACAACCCGAAGGCCGTCATCC-CGCACGCGGCGTTG-CTGCATCAGGCTTCCGCCCA 97 Query 62 TTGTCCAATATTCCCCACTGCTGCC 86 |||| |||||||||||||||||||| Sbjct 98 TTGTGCAATATTCCCCACTGCTGCC 122 >seq371971 Length=1724 Score = 87.8 bits (96), Expect = 4e-15 Identities = 83/101 (82%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||| || |||| ||||| | | | ||||||| ||| || |||||||| ||||| Sbjct 705 TTTACAACCC-AAGAGCCTTCCTCCCC-CACGCGGTCTTG-CTCCGTCAGGCTTGCGCCC 761 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 101 |||| || ||||||||||||||||||||||||||||||| Sbjct 762 ATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1029460016960