Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq793819 343 5e-92 seq957489 210 8e-52 SEQ43459 181 4e-43 seq1059232 145 3e-32 seq3316640 136 1e-29 seq1060892 109 2e-21 seq1210690 102 3e-19 seq987756 98.7 3e-18 seq3087612 95.1 4e-17 >seq793819 Length=3153 Score = 343 bits (380), Expect = 5e-92 Identities = 382/500 (76%), Gaps = 20/500 (4%) Strand=Plus/Minus Query 105 CAGTGCTCTACCTCCGGGAAGAAACACGCGAC-GCTGCACCTAAATGCATTTCGGGGAGA 163 ||||||| |||| || || |||| | | || ||||| ||| || |||||||||||||| Sbjct 1484 CAGTGCTTTACCCCCAGGTTTAAAC-CTCAACCGCTGCGCCTCAACGCATTTCGGGGAGA 1426 Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223 |||||||| | | ||| ||||||| ||||||||||| ||||| |||||| | | || Sbjct 1425 ACCAGCTAGCTCCGGGTTCGATTGGCATTTCACCCCTAACCACACCTCATCCGCCGATTT 1366 Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 |||||| | || ||||||| ||||||| ||| |||||| |||||| |||| ||||| Sbjct 1365 TTCAACATCGGTCGGTTCGGACCTCCACTTGGTTTTACCCAAGCTTCATCCTGGACATGG 1306 Query 284 ATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTT 343 |||||||| | ||||||||| | | || | ||||||||||| ||||||||| Sbjct 1305 TTAGATCACCCGGGTTCGGGTCTACAAATTATGACGTA-ACGCCCTATTCAGACTCGCTT 1247 Query 344 TCGCTACGGCTAC--CCCACACGGG-TTAACCTCGCGACACAACGCA-AACTCGCAGGCT 399 ||||| |||| | || | ||| ||||||| | || ||| ||||||| |||| Sbjct 1246 TCGCTTGGGCTGCAACCTATTCGGTCTTAACCT---GCCATAACTTGTAACTCGCCGGCT 1190 Query 400 CATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATT 459 ||| |||||| |||||||| |||| || | ||| | || |||| || | || Sbjct 1189 CATGCTTCAACAGGCACGCGGTCAG-----ACGTTAAAT---CGTC--CTCCCACTGCTT 1140 Query 460 GTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCC 519 |||||| | |||||||||| |||||||||||||| || ||||| ||||||||||||||| Sbjct 1139 GTAGGCTAACGGTTTCAGGTTCTATTTCACTCCCCTCCCGGGGTTCTTTTCACCTTTCCC 1080 Query 520 TCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGC 579 |||||||||| || | ||||||||||| |||||||||||| |||| | |||||| | Sbjct 1079 TCACGGTACTGGTTCTCTATCGGTCACACAGGAGTATTTAGCCTTACCTCGTGGTCGAGG 1020 Query 580 CAGATTCACACGAAATTTCA 599 |||||||||||| ||||||| Sbjct 1019 CAGATTCACACGGAATTTCA 1000 >seq957489 Length=559 Score = 210 bits (232), Expect = 8e-52 Identities = 235/310 (76%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 46 ACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATC 104 |||| ||| |||||||||||| | |||||| | | | |||||||| | Sbjct 139 ACTTTACGGTATTCGGAGTTTGCAAAGGGTTGGTAAGTCGGGATGACCCCCTAGCCTTAA 198 Query 105 CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAA 164 |||||||||||| ||| | | | ||| ||| |||||||| ||||||||||||| Sbjct 199 CAGTGCTCTACCCCCGTAAGTATTCGTCCGAGGCTCTACCTAAATAGATTTCGGGGAGAA 258 Query 165 CCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTT 224 ||||||||| | |||||||| ||||||||| |||| |||||||||||||||| | ||| Sbjct 259 CCAGCTATCTCCCGGTTTGATTAGCCTTTCACTCCTAGCCACAGGTCATCCCCTAACTTT 318 Query 225 TCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGA 284 ||||| | |||||||||||||||||| | | |||| | ||||||||||||||||| Sbjct 319 TCAACGTTAGTGGGTTCGGTCCTCCAGTTGATGTTACTCAACCTTCAACCTGCCCATGGC 378 Query 285 TAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTT 344 |||||||| | ||||||||| | | ||| ||| || ||||| || |||||| ||| Sbjct 379 TAGATCACCCGGTTTCGGGTCTACACCTTGCAACT-AT-CGCCCAGTTAAGACTCGGTTT 436 Query 345 CGCTACGGCT 354 | |||||||| Sbjct 437 CCCTACGGCT 446 >SEQ43459 Length=1370 Score = 181 bits (200), Expect = 4e-43 Identities = 240/329 (73%), Gaps = 3/329 (1%) Strand=Plus/Minus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| ||| | ||||| |||| | |||| | | ||| | || ||||||| Sbjct 1085 GACAACGGACGTTAG-CACCCGCTGTCTGTCTGCCGTGATTGAACTCCTAGGTATTCGGA 1027 Query 63 GTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCGG 121 ||||| || | |||||| | | | |||||||| ||| |||||||||||| || Sbjct 1026 GTTTGCATGGGGTTGGTAAGTCGGGATGACCCCCTAGCCCAAACAGTGCTCTACCCCCTA 967 Query 122 GAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTT 181 | | | || ||||||| |||||||| |||||| ||||||||||||||| | || | Sbjct 966 GG-GTTAGACACGACGCTCTACCTAAATAGATTTCGAGGAGAACCAGCTATCTCCGAGCT 908 Query 182 TGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTC 241 ||||| ||||||||| || ||||||| |||||||| | |||||||| | |||||||| Sbjct 907 TGATTAGCCTTTCACTCCGATCCACAACTCATCCCCAAATTTTTCAACATTTGTGGGTTC 848 Query 242 GGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCG 301 ||||||||| | |||| |||||||||| ||||||||||||| | | |||| Sbjct 847 GGTCCTCCAATGCCTGTTACGGCATCTTCAACCTGGCCATGGATAGATCGCCCGGTTTCG 788 Query 302 GGTCTTGATCGTGCCACTCATACGCCCTA 330 ||||| | || ||| || ||||||| Sbjct 787 GGTCTAATGCCAGCAACTAATTCGCCCTA 759 >seq1059232 Length=100 Score = 145 bits (160), Expect = 3e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 140 GCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCC 199 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 100 GCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGTGTTTGATTGGCCTTTCACCCC 41 Query 200 TATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||| |||||||||| |||||||| |||||||| Sbjct 40 TATCCACAACTCATCCCCTCCATTTTCAACTGAAGTGGGT 1 >seq3316640 Length=170 Score = 136 bits (150), Expect = 1e-29 Identities = 130/165 (79%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACC-ATCCAGTGCT 111 || ||||||||||||||| || |||||| |||||| |||| ||| |||||||||| Sbjct 1 GGTATTCGGAGTTTGGTTAGGATCAGTAAGCCTGTGGGGCCCCATTACCCATCCAGTGCT 60 Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171 ||||| || || | | |||||| |||||||| |||||| |||||||||||| Sbjct 61 CTACCCCCCGGGGTATTCGGATGACGCTCTACCTAAATAGATTTCGCAGAGAACCAGCTA 120 Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCC 216 || | |||||||||||||||||||||||| ||||| ||||||| Sbjct 121 TCTCCGAGTTTGATTGGCCTTTCACCCCTAGGCACAGCTCATCCC 165 >seq1060892 Length=100 Score = 109 bits (120), Expect = 2e-21 Identities = 77/88 (88%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201 ||||||||||||||||||||| || |||||| | |||||||||||||||||||||||| Sbjct 1 ACCTAAATGCATTTCGGGGAGTACGAGCTATTTCCGAGTTTGATTGGCCTTTCACCCCTA 60 Query 202 TCCACAGGTCATCCCCTCAGTTTTCAAC 229 |||||||||||||| | |||||||| Sbjct 61 TCCACAGGTCATCCAAAGACTTTTCAAC 88 >seq1210690 Length=100 Score = 102 bits (112), Expect = 3e-19 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA-GGGGTACT 506 |||| || |||||||||| ||||||||||||| ||||||||||| | ||||| || Sbjct 96 CTCCAACTGATTGTAGGCGTTCGGTTTCAGGTACTGTTTCACTCCCCTCGTCGGGGTGCT 37 Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGG 542 ||||||||||||||||||||||| || | ||||||| Sbjct 36 TTTCACCTTTCCCTCACGGTACTGGTTCACTATCGG 1 >seq987756 Length=100 Score = 98.7 bits (108), Expect = 3e-18 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201 |||||||| |||||| ||||||||||||| | ||||||| || |||||||||||||| Sbjct 83 ACCTAAATAGTTTTCGGAGAGAACCAGCTATTTCCAAGTTTGTTTAGCCTTTCACCCCTA 24 Query 202 TCCACAGGTCATCCCCTCAGTTTT 225 ||||||| ||||||||| |||||| Sbjct 23 TCCACAGCTCATCCCCT-AGTTTT 1 >seq3087612 Length=150 Score = 95.1 bits (104), Expect = 4e-17 Identities = 119/162 (73%), Gaps = 15/162 (9%) Strand=Plus/Plus Query 331 TTCGGACTCGCTTTCGCTACGGCTACCCCAC---ACGGGTTAACCTCGCGACACAACGCA 387 ||| |||||||||||||| ||||| | | | || | ||||||| || | ||| Sbjct 1 TTCAGACTCGCTTTCGCTTCGGCTCCTCTGCTGAACAGATTAACCTTGCTAGT-AACAGT 59 Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447 |||||| ||||||||| | ||||||||||||||||||| || ||| | | Sbjct 60 AACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCAGT---TAA--------TGGG 108 Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||||||| | |||||||| | |||||||||| ||||||||| Sbjct 109 CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTATTTCAC 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1745472506368