Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq793819 237 4e-60 seq957489 125 2e-26 seq1210690 114 3e-23 seq3496530 111 4e-22 SEQ43459 100 7e-19 seq3087612 98.7 2e-18 seq2754088 93.3 1e-16 >seq793819 Length=3153 Score = 237 bits (262), Expect = 4e-60 Identities = 311/416 (75%), Gaps = 15/416 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| |||| | ||||||||| |||||||||| |||||| || || || Sbjct 1386 CCACACCTCAT-CCGCCGA-TTTTTCAACATCGGTCGGTTCGGACCTCCACTTGGTT-TT 1330 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| || |||||| ||||| || |||||||| | Sbjct 1329 ACCCAAGCTT-CATCCTGGACAT-GGTTAGATCACCCGGGTT-CGGGTCTACAAATTAT- 1274 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC--CCTATTCGGT--TAAGC 184 ||| |||||||| | ||||||||||| |||| | || | |||||||||| ||| | Sbjct 1273 GACGTAACGCCCTATTCAGACTCGCTTT-CGCTTGGGCTGCAACCTATTCGGTCTTAACC 1215 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 | |||| ||| |||| | | ||| | ||| ||| |||| |||| | ||| Sbjct 1214 T--GCCATAACTTGTAACTCGCCGGCTCATGCTTCAACAGGCACGCGGTCAGACGTTAAA 1157 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | ||||||||||||||| || ||||||||||| ||||||||||||||||| ||||| Sbjct 1156 TCGTCCTCCCACTGCTTGTAGGCTAACGGTTTCAGGTTCTATTTCACTCCCCTC-CCGGG 1098 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| |||||||||||||||||| |||| |||||||||| ||| |||||||||| Sbjct 1097 GTTCTTTTCACCTTTCCCTCACGGTACTGGTTCTCTATCGGTCACACAGGAGTATTTAGC 1038 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| ||||| || ||||| || | |||| || ||||||| ||||||| Sbjct 1037 CTTACCTCGTGGTCGAGGCAGATTCACACGGAATTTCACGGGCTCCGTGCTACTCG 982 >seq957489 Length=559 Score = 125 bits (138), Expect = 2e-26 Identities = 134/165 (81%), Gaps = 9/165 (5%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| | ||||||||||| || ||||||||| ||||| |||| ||||||||||||||||| Sbjct 291 TCCTAGCCACAGGTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGTCCTCCAGTT- 347 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 | ||||| ||||| |||||||||||||| || |||||| ||||| ||||||||||| Sbjct 348 GATGTTACTCAACC-TTCAACCTGCCCAT-GGCTAGATCACCCGG-TTTCGGGTCTA-CA 403 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCT 167 || || |||| ||||| ||||||||| |||| ||||| || Sbjct 404 CCTTGCAACTA-TCGCCCAGTTAAGACTCG-GTTTCCCTACGGCT 446 Score = 77.0 bits (84), Expect = 8e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTC 298 ||||||| |||||||||||| | ||||||||||| ||||||||||||||||| Sbjct 506 GGGCTCCTACTGCTTGTACGTACACGGTTTCAGGTTCTATTTCACTCCCCTC 557 >seq1210690 Length=100 Score = 114 bits (126), Expect = 3e-23 Identities = 83/96 (86%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 |||| |||| ||||| || | |||||||||| || ||||||||||||| |||||| || Sbjct 96 CTCCAACTGATTGTAGGCGTTCGGTTTCAGGTACTGTTTCACTCCCCTCGTCGGGGTGCT 37 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGG 345 |||| |||||||||||||||||| |||||||||||| Sbjct 36 TTTCACCTTTCCCTCACGGTACTGGTTCACTATCGG 1 >seq3496530 Length=196 Score = 111 bits (122), Expect = 4e-22 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 320 CCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||||||||||| ||||||||||||||||| || |||| |||||||| || | |||||| Sbjct 1 CCCTCACGGTACTGGTTCACTATCGGTCAGTAAGGAGTACTTAGCCTTCGAAGGTGGTCC 60 Query 380 CCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 || || |||||||| | |||| |||| |||| |||||| Sbjct 61 TCCGATCTTCAGACAGAATTTCACGTGTTCCGCCCTACT 99 >SEQ43459 Length=1370 Score = 100 bits (110), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 210 CCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCAT 269 ||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||| Sbjct 687 CCCATTATACAAAAGGTACGCAGTCACAGAACAA-GTCTGCTCCTACTGCTTGTACGCAT 629 Query 270 ACGGTTTCAGGA 281 |||||||||||| Sbjct 628 ACGGTTTCAGGA 617 Score = 91.5 bits (100), Expect = 4e-16 Identities = 110/141 (78%), Gaps = 8/141 (6%) Strand=Plus/Minus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||||||||| |||| || || ||||||||| | || |||||||||||||| | Sbjct 892 TCCGATCCACAACTCATCCCC--AAATTTTTCAACATTTGTGGGTTCGGTCCTCCAATGC 835 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 | ||||| | | ||||||||| |||| ||||||||||||||| ||||||||||| | Sbjct 834 CT-GTTACGGCATC-TTCAACCTGGCCAT-GGATAGATCGCCCGG-TTTCGGGTCTA-AT 780 Query 123 CCCAGCGACT-AGACGCCCTA 142 ||||| ||| | ||||||| Sbjct 779 GCCAGCAACTAATTCGCCCTA 759 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 353 GTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGT 412 ||||||||||||||||||||||||||||||||| ||||| ||| | | |||| ||| Sbjct 544 GTAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGTCAAGATAACACGTGTCCCGA 485 Query 413 CCTACT 418 |||||| Sbjct 484 CCTACT 479 >seq3087612 Length=150 Score = 98.7 bits (108), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 5/149 (3%) Strand=Plus/Plus Query 146 AGACTCGCTTTTCGCTACGCCTCCCCTATT---CGGTTAAGCTTTGCCACTGAAAATAAG 202 ||||||||||| |||| || |||| || | | | | | | |||| | | | | ||| Sbjct 4 AGACTCGCTTT-CGCTTCGGCTCCTCTGCTGAACAGATTAACCTTGCTAGTAACAGTAAC 62 Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTG 262 ||| | | |||||| ||||||| |||| |||||||| || |||||||| || ||||| Sbjct 63 TCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCAGTTAA-TGGGCTCCGACCGCTTG 121 Query 263 TACGCATACGGTTTCAGGATCTATTTCAC 291 || || |||||||||||| |||||||||| Sbjct 122 TAGGCGTACGGTTTCAGGTTCTATTTCAC 150 >seq2754088 Length=132 Score = 93.3 bits (102), Expect = 1e-16 Identities = 102/129 (79%), Gaps = 5/129 (4%) Strand=Plus/Minus Query 109 TTTCGGGTCTATTTCCCAGCGACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCT 167 |||||||||| | |||| ||| | ||||||| ||||||||||||| |||| ||||| Sbjct 131 TTTCGGGTCTGAT-CCCACGAACTCATTCGCCCTATTAAGACTCGCTTT-CGCTGCGCCT 74 Query 168 CC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGT 226 | |||| | |||||||| || ||| | |||||| |||||||||||||||||||| Sbjct 73 TCGCCTAGCGGCTTAAGCTT-GCTCGTGAGACCAAGTCGATGACCCATTATACAAAAGGT 15 Query 227 ACGCAGTCA 235 |||| |||| Sbjct 14 ACGCTGTCA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192329810688