Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3406409 307 2e-81 seq528855 248 2e-63 seq793819 205 2e-50 seq2820974 89.7 1e-15 seq2522988 86.0 1e-14 seq3583707 78.8 2e-12 seq957489 78.8 2e-12 seq2674601 73.4 9e-11 >seq3406409 Length=182 Score = 307 bits (340), Expect = 2e-81 Identities = 170/170 (100%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 123 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 63 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 13 >seq528855 Length=1053 Score = 248 bits (274), Expect = 2e-63 Identities = 137/137 (100%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 68 CCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCATTCTC 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 CCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCATTCTC 976 Query 128 ACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCC 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 ACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCC 1036 Query 188 TACCCAACCACACAGGT 204 ||||||||||||||||| Sbjct 1037 TACCCAACCACACAGGT 1053 >seq793819 Length=3153 Score = 205 bits (226), Expect = 2e-50 Identities = 296/408 (73%), Gaps = 21/408 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| || |||| |||| || ||| | | | Sbjct 1981 CGACTACGCTTTTCAGCCTCGCCTTAGGTCCTGACTAACCCTCCGCGGACGAGCCGTCCG 1922 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA----CGCTACTCATG 116 ||||||||| | |||| | ||||||| ||||| ||| ||||||| | | Sbjct 1921 GAGGAACCCTTAGGGTTTCGGGGTGTGGGATTCTCACCC---ACATTTTCGCTACTTAAG 1865 Query 117 CCTGCATTCTCACTCGCATCA-ACTCCACCACACAGTCACCCGGCA---GCTTCACC--A 170 || |||||||||| || | || |||||| | | || ||||||| | Sbjct 1864 CCGACATTCTCACT----TCTGATTCGTCCACACCTGCTTGCCGCTAGTGCTTCACACTA 1809 Query 171 CTGACACGACGCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||| ||||||||||||| | | || |||||||||||| | ||||| Sbjct 1808 CT-ACAGAACGCTCCCCTACCAATAGTTGCCTATT-CCACAGCTTCGGTACACTACTTA- 1752 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | |||| ||||||| | | | ||||||||||||||||||||||||||||| || Sbjct 1751 GCCCCGTT-CATTTTCGGCGCAGGAGCGCTTGACCAGTGAGCTATTACGCACTCTTTTAA 1693 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 ||||||||||||| | || |||||||||||||||| ||| |||| |||||| |||| Sbjct 1692 GGATGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTGGGCACTCCCACCTCCTTTATCACT 1633 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||| | || ||| ||||||||| || |||||||||||||||||| Sbjct 1632 TAGTAGTGATTTGGGGACCTTAGCTGGTGGTCTGGGCTGTTTCCCTCT 1585 >seq2820974 Length=135 Score = 89.7 bits (98), Expect = 1e-15 Identities = 84/107 (79%), Gaps = 5/107 (5%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCA 266 |||||||| || ||| ||||||| ||||| ||| ||| | | |||| ||||| Sbjct 29 GCTTCGGCTCATGGCTTGAGCCCCGTTACATCTTCGCCGCAGGACAACTTATTTAGACCA 88 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACC 313 ||||||| |||||| ||||| ||||||||||||||| ||||||||| Sbjct 89 GTGAGCTGTTACGCTATCTTTAAAGGATGGCTGCTTCTAAGCCAACC 135 >seq2522988 Length=124 Score = 86.0 bits (94), Expect = 1e-14 Identities = 87/111 (78%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 208 CACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAG 267 || |||||||| || ||||| |||| || ||||| || || | || |||||| Sbjct 109 CATAGCTTCGGTGGTATACTTATGCCCGATTA--TTATCCATGCAAAACCGCTCGACCAG 52 Query 268 TGAGCTATTACGCACTCTTTCAA-GGATGGCTGCTTCCAAGCCAACCTCCT 317 |||||| ||||||||||||| || | |||||||||||||||||||| |||| Sbjct 51 TGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCT 1 >seq3583707 Length=216 Score = 78.8 bits (86), Expect = 2e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT--TCCCACT 350 |||||||||||||||||||| |||| | |||||| ||| | ||| || || | | ||| Sbjct 7 ATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTAAGCAGTTTCACCTCGTTTATTCAACT 66 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | | || ||| |||||||||||| |||||| | ||||||||||| Sbjct 67 TAACATATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCCTCTCG 116 >seq957489 Length=559 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/95 (80%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 305 AAGCCAACCTCCTGGTTGTCTACG-CAACTCCACATCCTTTCCCACTGAGTCACCACTTA 363 ||||||||||||||||||| | | | ||| || | |||||||||| || || | ||| Sbjct 3 AAGCCAACCTCCTGGTTGTTTTGGTCGTCTC-ACCTGCTTTCCCACTTAGCCATGAATTA 61 Query 364 GGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||||||||||||| | || ||| ||||||||||| Sbjct 62 GGGGCCTTAGCTGTAGGTCAGGGTTGTTTCCCTCT 96 >seq2674601 Length=129 Score = 73.4 bits (80), Expect = 9e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAG 364 ||||||||||||||||||| | | |||| | |||||||||| || || | || | Sbjct 127 AAGCCAACCTCCTGGTTGTTTTGGTCGTCCCACCTGCTTTCCCACTTAGCCATGAATTGG 68 Query 365 GGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 |||||||||| | | || ||| |||||||||||| Sbjct 67 GGGCCTTAGCCGGAGGTCAGGGTTGTTTCCCTCTC 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1130869511168