Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2904902 161 8e-38 seq3691092 122 7e-26 seq3778868 107 2e-21 seq3806759 102 7e-20 seq475834 93.3 3e-17 >seq2904902 Length=139 Score = 161 bits (178), Expect = 8e-38 Identities = 119/139 (86%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||| Sbjct 1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTTTGGGATTGGCTCCACCTCGCG 60 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || || |||| |||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 61 GCTTCGCAACCCTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 120 Query 121 TGAGGACTTGACGTCATCC 139 ||| ||||||||||| ||| Sbjct 121 TGATGACTTGACGTCGTCC 139 >seq3691092 Length=251 Score = 122 bits (134), Expect = 7e-26 Identities = 125/161 (78%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||| || ||||| | ||| | || | || | |||||| |||| |||||| Sbjct 166 CGAGTTGCAGCCTGCAATCTGAACTGAGGAGAGGTTTAC-GGGATTGGCTCAGACTCGCG 108 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||||| |||| ||| |||||||| ||||||| ||||| | |||||| || Sbjct 107 TCTTGGCTACCCTTTGTCCCCCCCATTGTAGTACGTGTGTAGCCCAGGACGTAAGGGGCA 48 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 47 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 7 >seq3778868 Length=299 Score = 107 bits (118), Expect = 2e-21 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||| ||| || ||| | | ||| ||||| ||| ||| Sbjct 223 TCGAGTTGCAGACTCCGATCCGAACTGTGACCGGTTTTATAG-ATTCGCTCCGCCTTGCG 165 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || ||||||| |||||||| ||||||| |||| | |||||||| Sbjct 164 ACGTGGCTGCTCTCTGTACCGGCCATTGTAGCACGTGTGTGGCCCAGGACGTAAGGGCCG 105 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| || ||||||||||||||||||||||| ||||||| Sbjct 104 TGATGATTTGACGTCATCCCCACCTTCCTCGCGGTTTG 67 >seq3806759 Length=320 Score = 102 bits (112), Expect = 7e-20 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| || Sbjct 187 CCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCCATGAGGACTTGACGTCATCCACA 128 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||| | || |||| Sbjct 127 CCTTCCTCCCGCTTATCAC 109 >seq475834 Length=529 Score = 93.3 bits (102), Expect = 3e-17 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 41 GGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGA 100 |||||||||||| |||||||| | || |||||||||| |||||||| ||||||| Sbjct 431 GGGATTAGCTCCACCTCGCGGTATTGCAGCCCTCTGTACCGGCCATTGTAGCACGTGTGT 490 Query 101 AGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCC 139 ||||| | |||||||||||| ||||||||||| ||| Sbjct 491 AGCCCAGGTCGTAAGGGCCATGATGACTTGACGTCGTCC 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400007823540