Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq371971 185 1e-44 seq2967281 120 5e-25 seq253078 109 9e-22 seq1064126 91.5 2e-16 seq3152938 89.7 8e-16 >seq371971 Length=1724 Score = 185 bits (204), Expect = 1e-44 Identities = 197/260 (76%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| |||||| ||||||||| | |||||| ||| |||||||| ||||||| || Sbjct 332 GCTTTCGTCCCTCAGTGTCAGTTACGGCCCAGCAGAGCGCTTTCGCCACCGGTGTTCTTC 391 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | ||||||||||||||||||||||||| |||||||| |||| || | | |||| || Sbjct 392 CCGATATCTACGCATTTCACCGCTACACCGGGAATTCCCTCTGCCCCTACCGTACTCTAG 451 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 ||||||| | ||| | ||| |||| | ||| ||| | |||||| Sbjct 452 CTGTTCAGTTTCCACTGCCTTTCAGTAGTTAAGCCACTGTCTTTGACAGCAGACTTGAAC 511 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || ||||| | |||||| |||||| | ||||||||||||||||| ||| ||||||| Sbjct 512 AGCCACCTACGGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCCTCCTCCGTATTA 571 Query 246 CCGCGGCTGCTGGCACGTAG 265 ||||||||||||||||| || Sbjct 572 CCGCGGCTGCTGGCACGGAG 591 >seq2967281 Length=143 Score = 120 bits (132), Expect = 5e-25 Identities = 95/114 (83%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||| |||||| ||||||||||||| | |||| | ||||||||||||||||||| Sbjct 27 CCCACACTTTCGTACCTCAGCGTCAGTATCGAGCCAGTGAGCCGCCTTCGCCACTGGTGT 86 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTC 114 ||||||| ||||||||| |||||||| |||||| ||||||||| | |||||| Sbjct 87 TCCTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTC 140 >seq253078 Length=721 Score = 109 bits (120), Expect = 9e-22 Identities = 182/273 (67%), Gaps = 44/273 (16%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTG-TCCAGCAATCCGCCTTCGCCACTGGTG 59 ||||||||||||| ||||||||||||| | || ||||| | |||||||||||||| || Sbjct 490 CCCACGCTTTCGCACCTCAGCGTCAGT-ATTGATCCAGTGAGTCGCCTTCGCCACTGATG 432 Query 60 TTCCTCCGTATATCTAC------------------------------------------G 77 ||||||| |||||||| | Sbjct 431 TTCCTCCAGATATCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG 372 Query 78 CATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTTTC 137 |||||||||||||||| |||||||| | ||||| | |||| ||| |||| || Sbjct 371 CATTTCACCGCTACACCTGGAATTCCACTCACCTCTACCATACTCTAGACTCGCAGTATC 312 Query 138 AAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACAC 197 ||||||| | ||||||||||| | |||||||||||||| | |||||||| | Sbjct 311 AAATGCAATTCCTAGGTTGAGCCCAGGGCTTTCACATCTGACTGACAAATCCGCCTACGC 252 Query 198 GCCCTTTACACCCAATAAATCCGGATAACGCTT 230 || |||||| |||| ||| |||| |||||||| Sbjct 251 GCGCTTTACGCCCAGTAATTCCGATTAACGCTT 219 >seq1064126 Length=100 Score = 91.5 bits (100), Expect = 2e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 55 TGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTC 114 |||||||||||| ||| ||| ||||||||||||||||||| |||||||| || ||||| Sbjct 100 TGGTGTTCCTCCATATCTCTGCGCATTTCACCGCTACACATGGAATTCCACTTTCCTCTT 41 Query 115 CAGCACTCAAGAAAAACAGTTTCAAATG 142 | ||||||||| ||||||| |||| Sbjct 40 CTGCACTCAAGTTTTCCAGTTTCCAATG 13 >seq3152938 Length=155 Score = 89.7 bits (98), Expect = 8e-16 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210 ||||||||||| | |||||| | |||| || |||||||| | |||||| ||| Sbjct 42 GGGTTGAGCCCTGGGATTTCACCCCCAACTTTCCAATCCGCCTACGTACGCTTTACGCCC 101 Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACG 262 | ||| |||| | |||||| || ||| |||||||||||||||||||||||| Sbjct 102 AGTAATTCCGAACAACGCTAACCCCCTCCGTATTACCGCGGCTGCTGGCACG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796938663822