Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq698051 125 5e-27 seq793819 93.3 3e-17 seq446766 82.4 5e-14 seq2752904 73.4 3e-11 >seq698051 Length=436 Score = 125 bits (138), Expect = 5e-27 Identities = 112/138 (81%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 2 ACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGC 61 ||||||||||||||||||||||||||||||| || |||||||||||||||| || | Sbjct 436 ACCTTTTATCCGTTGAGCGATGGCCCTTCCACTCGGGACCACCGGATCACTATGGCCGAC 377 Query 62 TTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATC 121 ||||| ||||||| | |||| ||||||| ||| || ||| |||||||||||| Sbjct 376 TTTCGTCTCTGCTCGACTTGTCAGTCTCGCAGTCAGGCTGGCTTCTGCCATTGCACTCA- 318 Query 122 ACTA-CGATTTCCGACCG 138 || | ||||||||||||| Sbjct 317 ACGAGCGATTTCCGACCG 300 >seq793819 Length=3153 Score = 93.3 bits (102), Expect = 3e-17 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||| ||||| || || |||||||||| | || Sbjct 3026 TAACTTTTATCCGTTGAGCGACGGCCTTTCCACGCAGCACCGTCGGATCACTAAGGCCGA 2967 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||| ||| |||||| | ||| |||| ||||||| | Sbjct 2966 CTTTCGTCCCTGCTCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTATGCCTTTGCACTCT 2907 Query 121 CACTAC-GATTTCCGACC 137 || | ||||||| ||| Sbjct 2906 -ACGGCTGATTTCCAACC 2890 >seq446766 Length=1159 Score = 82.4 bits (90), Expect = 5e-14 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 48 TCACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTT 107 |||||||||||| |||||| | |||||| | |||| ||||||| |||||| | ||| | Sbjct 1 TCACTATGACCTACTTTCGTACCTGCTCGACTTGTCAGTCTCGCAGTCAAGCGCGCTTAT 60 Query 108 GCCATTGCACTATCACTACGATTTCCGACC 137 |||||| ||||| | | ||||||||||| Sbjct 61 GCCATTACACTAACCGCATGATTTCCGACC 90 >seq2752904 Length=132 Score = 73.4 bits (80), Expect = 3e-11 Identities = 72/93 (77%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 48 TCACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTT 107 |||||||||||| |||||| | |||||| | ||| ||||||| | |||| ||| | Sbjct 132 TCACTATGACCTACTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTCT 73 Query 108 GCCATTGCACTATCACTACGATTTCCGACCGTA 140 ||||| ||||| | |||||| |||||||||| Sbjct 72 ACCATTACACTAACCGTACGATGTCCGACCGTA 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338904669400