Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3771724 174 2e-41 seq3837610 163 4e-38 seq3176592 150 3e-34 seq2362498 141 1e-31 seq1991916 129 9e-28 seq1384319 109 8e-22 seq2833487 104 4e-20 seq1468331 104 4e-20 seq793819 93.3 6e-17 >seq3771724 Length=294 Score = 174 bits (192), Expect = 2e-41 Identities = 152/189 (80%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 ||||| ||||| |||||||||| |||||| ||||| |||| ||| ||||| || Sbjct 189 CGAGGCTCGCTTCCCGCTTAGATGCTTTCAGCGGTTATCGATTCCGAACGTAGCTACCGG 130 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 || |||| |||||| ||||| | ||||||||||| ||||| |||||||||||||| Sbjct 129 GCAATGCCATTGGCATGACAACCCGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTA 70 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| | ||||||||||||| | || ||||||||| | |||||||||||||||||||| Sbjct 69 CTAGGAGCAGCTCCTCTCAATTCTCAAACGCCCACGGCAGATAGGGACCGAACTGTCTCA 10 Query 181 CGACGTTCT 189 ||||||||| Sbjct 9 CGACGTTCT 1 >seq3837610 Length=351 Score = 163 bits (180), Expect = 4e-38 Identities = 154/195 (79%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| ||||||||| |||||| |||||| ||| || | ||| ||| | Sbjct 157 GAGGTGGGCTTCCCACTTAGATGCTTTCAGCGGTTATCCGCTCCGCACATGGCTACCCTG 216 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | ||| | |||||| | ||| ||| |||||| ||| |||| |||||||||||||||| Sbjct 217 CGTATACCGTTGGCACGATAACAGGTACACCAGCGGTGCGTCCTTCCCGGTCCTCTCGTA 276 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| ||||||||||| || |||||| | |||||| ||||||||||||||| Sbjct 277 CTAGGGAAGGCTCCTCTCAATGCTCTTACGCCTGCACCGGATATGGACCGAACTGTCTCA 336 Query 181 CGACGTTCTGAACCC 195 ||||||||||||||| Sbjct 337 CGACGTTCTGAACCC 351 >seq3176592 Length=157 Score = 150 bits (166), Expect = 3e-34 Identities = 127/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 35 TTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGA 94 ||||| | || || |||| ||||| |||| |||||||| |||||||| ||||||| Sbjct 156 TTATCACAACCCGACGTAGCCAACCAGCCATGCTCTTGGCAGAACAACTGGCACACCAGA 97 Query 95 GGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCA 154 ||| |||| || ||||||||||||||||| |||||| | |||||| ||||| ||| | Sbjct 96 GGTCAGTCCGTCTCGGTCCTCTCGTACTAAAGACAGCCCTTCTCAAGATTCCTCCGCGCG 37 Query 155 CGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190 | |||||||||||||||||||||| |||||||||| Sbjct 36 CAGCGGATAGGGACCGAACTGTCTCACGACGTTCTG 1 >seq2362498 Length=119 Score = 141 bits (156), Expect = 1e-31 Identities = 95/106 (90%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 170 GAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCA 229 |||||||||| ||||||||| |||||||||| ||| ||||||||| ||||||||||| Sbjct 1 GAACTGTCTCACGACGTTCTAAACCCAGCTCACGTACCTCTTTAAACGGCGAACAGCCGT 60 Query 230 ACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||||| || |||||||||||||||| |||||||||||| Sbjct 61 ACCCTTGGGACCTGCTCCAGCCCCAGGATGAGATGAGCCGACATCG 106 >seq1991916 Length=111 Score = 129 bits (142), Expect = 9e-28 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 79 CAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTC 138 |||||||| |||||| || | || || |||||||||||||||||| || || |||||||| Sbjct 111 CAACTGGTCCACCAGTGGATCGTTCACCCCGGTCCTCTCGTACTAGGGGCAACTCCTCTC 52 Query 139 AAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCT 189 || | |||||| |||||| |||||||||||||||||||| ||||||||| Sbjct 51 AAGTATCCTACACCCACGGAAGATAGGGACCGAACTGTCTCACGACGTTCT 1 >seq1384319 Length=101 Score = 109 bits (120), Expect = 8e-22 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 |||||||||||||| || |||||| ||||||||||| |||||||||||| ||||||| Sbjct 1 AACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTTCAGC 60 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 ||||||||| || |||||||||||| Sbjct 61 CCCAGGATGTGATGAGCCGACATCG 85 >seq2833487 Length=136 Score = 104 bits (114), Expect = 4e-20 Identities = 62/65 (95%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 211 TTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGA 270 |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct 136 TTAATGGGCGAACAGCCCAACCCTTGGGACCTTCTCCAGCCCCAGGATGTGACGAGCCGA 77 Query 271 CATCG 275 ||||| Sbjct 76 CATCG 72 >seq1468331 Length=102 Score = 104 bits (114), Expect = 4e-20 Identities = 62/65 (95%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 211 TTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGA 270 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct 1 TTAATGGGCGAACAGCCCAACCCTTGGGACCGACTCCAGCCCCAGGATGCGACGAGCCGA 60 Query 271 CATCG 275 ||||| Sbjct 61 CATCG 65 >seq793819 Length=3153 Score = 93.3 bits (102), Expect = 6e-17 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 210 TTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCG 269 ||||||||||||||||||||||||||||||| |||| | |||||||| || || |||||| Sbjct 3153 TTTAATGGGCGAACAGCCCAACCCTTGGGACGTACTACCGCCCCAGGTTGCGATGAGCCG 3094 Query 270 ACATCG 275 |||||| Sbjct 3093 ACATCG 3088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750783914952