Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq2704621 127 5e-27 seq826873 125 2e-26 seq2459808 114 3e-23 seq469292 114 3e-23 seq371971 109 1e-21 seq1721446 86.0 1e-14 seq1145574 80.6 6e-13 seq2801840 75.2 3e-11 >seq2704621 Length=130 Score = 127 bits (140), Expect = 5e-27 Identities = 101/120 (84%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCT-TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGC 59 ||| |||||||||| ||| | || || ||||||||||||||||| |||| |||| Sbjct 11 GTAGTTTACAACCCATAGGGCAGTCATCCTACACGCGGCATGGCTGGTTCAGAGTTGCCT 70 Query 60 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 119 |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| || Sbjct 71 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACC 130 >seq826873 Length=536 Score = 125 bits (138), Expect = 2e-26 Identities = 161/219 (74%), Gaps = 21/219 (10%) Strand=Plus/Plus Query 202 GGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCT-TGCGACGTTATGC 260 ||| ||||| |||| || ||| |||||| ||||| |||| | | | ||| |||| Sbjct 9 GGGCTCATCTAATAGCGAAAGGTCCGAAGATCCCCTCCTTTCCCCCGTAGGGCGT-ATGC 67 Query 261 GGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTAC 320 ||||||||| |||||||| | ||| |||||| | | ||| || |||||| | |||| Sbjct 68 GGTATTAGCAGCCGTTTCCGGCTGTTGTCCCCCACTACTAGGTAGATTCCCACGCGTTAC 127 Query 321 TCACCCGTCCGCC-----ACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGA 375 ||||||||||||| |||| || ||||| | || || || |||| Sbjct 128 TCACCCGTCCGCCGCTTTACTCATC-CCGAAGGA-----CT--------TTCGCGCTCGA 173 Query 376 CTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||||||||||||||||||||||||||||| Sbjct 174 CTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 212 >seq2459808 Length=122 Score = 114 bits (126), Expect = 3e-23 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||| || || |||||||| | |||||||||||||| |||||||| Sbjct 40 TTTACAACCCGAAGGCCGTCATCCCGCACGCGGCGTTGCTGCATCAGGCTTCCGCCCATT 99 Query 65 GTGCAATATTCCCCACTGCTGCC 87 ||||||||||||||||||||||| Sbjct 100 GTGCAATATTCCCCACTGCTGCC 122 >seq469292 Length=320 Score = 114 bits (126), Expect = 3e-23 Identities = 109/138 (79%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 143 ACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTG 202 ||||||||||||||||||||| |||| ||||||||| | ||||||||||||||||| || Sbjct 134 ACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACTTG 75 Query 203 GGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGG 262 || ||| | | ||||| |||||| ||| |||||||| ||| |||||||| Sbjct 74 GGCCAATCTAAAGGCGAGAG--CCGAAG----CCCCCTTTGGTCCGTAGACATTATGCGG 21 Query 263 TATTAGCCACCGTTTCCA 280 ||||||| |||||||| Sbjct 20 TATTAGCAGTCGTTTCCA 3 >seq371971 Length=1724 Score = 109 bits (120), Expect = 1e-21 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| | |||||| || ||||||| | ||| | ||||||||||||||||| Sbjct 705 TTTACAACCCAAGAGCCTTCCTCCCCCACGCGGTCTTGCTCCGTCAGGCTTGCGCCCATT 764 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 102 | | || ||||||||||||||||||||||||||||||| Sbjct 765 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 802 >seq1721446 Length=106 Score = 86.0 bits (94), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 6/107 (6%) Strand=Plus/Plus Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 |||||| |||| | ||||||||||||||||||| || || ||| |||||| || Sbjct 6 AGGCAGATTCCTAAGCATTACTCACCCGTCCGCCGCTA---AGATAAGGTGCAAGCACCT 62 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC 406 | | | ||| ||||||||||||||||| ||||||||||||||||| Sbjct 63 -CATCT--CCGCTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTC 106 >seq1145574 Length=100 Score = 80.6 bits (88), Expect = 6e-13 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 146 AGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTGGGT 205 ||||| ||||||||||| ||| |||| ||||||| ||||||||||||||| | | || Sbjct 1 AGCTACAGATCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCCGACTTAGGC 60 Query 206 TCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTT 242 ||||| ||| | ||| |||||| ||||| |||| Sbjct 61 TCATCTATTAGCGCAAGGTCCGAAGATCCCCTGCTTT 97 >seq2801840 Length=134 Score = 75.2 bits (82), Expect = 3e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCA 62 |||||| |||| | ||||||| ||| ||||||||||||||| |||||||||||||||| Sbjct 76 CTTTACGACCCTAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTGCGCCCA 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1173891720832